Information for 3-GTGGCACTGYGCACCC (Motif 6)

A C T G A C G T A T C G A C T G A G T C C T G A A G T C C G A T A C T G A G C T A T C G A G T C G T C A T A G C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G A C G T A C T G A T G C C T A G A G T C C G T A A C T G A G C T A C T G A G T C A T G C C G T A A G T C
p-value:1e-13
log p-value:-3.052e+01
Information Content per bp:1.848
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.3 +/- 27.3bp
Average Position of motif in Background26.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0199.1_Zfp161_2/Jaspar

Match Rank:1
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GTGGCACTGYGCACCC
-NNGCNCTGCGCGGC-
 A C T G A C G T A T C G A C T G A G T C C T G A A G T C C G A T A C T G A G C T A T C G A G T C G T C A T A G C A G T C A G T C
A C G T T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C A C G T

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:2
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GTGGCACTGYGCACCC
-TGGCACCATGCCAA-
 A C T G A C G T A T C G A C T G A G T C C T G A A G T C C G A T A C T G A G C T A T C G A G T C G T C A T A G C A G T C A G T C
A C G T A C G T A C T G A C T G A G T C G C T A T A G C A T G C C T G A G C A T A C T G A G T C A G T C C G T A C G T A A C G T

Hic1/MA0739.1/Jaspar

Match Rank:3
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--GTGGCACTGYGCACCC
GGTTGGCAT---------
 A C G T A C G T A C T G A C G T A T C G A C T G A G T C C T G A A G T C C G A T A C T G A G C T A T C G A G T C G T C A T A G C A G T C A G T C
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:4
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GTGGCACTGYGCACCC
AATCGCACTGCATTCCG
 A C G T A C T G A C G T A T C G A C T G A G T C C T G A A G T C C G A T A C T G A G C T A T C G A G T C G T C A T A G C A G T C A G T C
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-GTGGCACTGYGCACCC
CTTGGCANNNTGCCAA-
 A C G T A C T G A C G T A T C G A C T G A G T C C T G A A G T C C G A T A C T G A G C T A T C G A G T C G T C A T A G C A G T C A G T C
A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A A C G T

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-GTGGCACTGYGCACCC
NTTGGCANN--------
 A C G T A C T G A C G T A T C G A C T G A G T C C T G A A G T C C G A T A C T G A G C T A T C G A G T C G T C A T A G C A G T C A G T C
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:7
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--GTGGCACTGYGCACCC
NNTTGGCANN--------
 A C G T A C G T A C T G A C G T A T C G A C T G A G T C C T G A A G T C C G A T A C T G A G C T A T C G A G T C G T C A T A G C A G T C A G T C
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:8
Score:0.48
Offset:-4
Orientation:reverse strand
Alignment:----GTGGCACTGYGCACCC
NNNNTTGGCGCCGANNN---
 A C G T A C G T A C G T A C G T A C T G A C G T A T C G A C T G A G T C C T G A A G T C C G A T A C T G A G C T A T C G A G T C G T C A T A G C A G T C A G T C
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T A C G T A C G T A C G T

CREB3L1/MA0839.1/Jaspar

Match Rank:9
Score:0.48
Offset:-7
Orientation:reverse strand
Alignment:-------GTGGCACTGYGCACCC
TGATGACGTGGCAN---------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A T C G A C T G A G T C C T G A A G T C C G A T A C T G A G C T A T C G A G T C G T C A T A G C A G T C A G T C
G A C T C T A G T C G A G A C T A C T G G C T A A G T C A T C G A G C T C T A G C A T G G A T C C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:10
Score:0.47
Offset:0
Orientation:forward strand
Alignment:GTGGCACTGYGCACCC
TTGGCA----------
 A C T G A C G T A T C G A C T G A G T C C T G A A G T C C G A T A C T G A G C T A T C G A G T C G T C A T A G C A G T C A G T C
G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T