Information for 3-GRGCTTCRGAGAG (Motif 5)

A C T G C T A G A C T G A G T C A C G T A C G T A G T C C T G A A C T G C G T A A C T G C G T A A C T G
Reverse Opposite:
A G T C A C G T T A G C C G A T A G T C A G C T A C T G C G T A C G T A A C T G A G T C A G T C A G T C
p-value:1e-13
log p-value:-3.052e+01
Information Content per bp:1.877
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.8 +/- 13.9bp
Average Position of motif in Background45.5 +/- 2.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GRGCTTCRGAGAG
--GCTTCC-----
 A C T G C T A G A C T G A G T C A C G T A C G T A G T C C T G A A C T G C G T A A C T G C G T A A C T G
A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:GRGCTTCRGAGAG
-NGCTN-------
 A C T G C T A G A C T G A G T C A C G T A C G T A G T C C T G A A C T G C G T A A C T G C G T A A C T G
A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:GRGCTTCRGAGAG
TGGTTTCAGT---
 A C T G C T A G A C T G A G T C A C G T A C G T A G T C C T G A A C T G C G T A A C T G C G T A A C T G
G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:4
Score:0.50
Offset:2
Orientation:forward strand
Alignment:GRGCTTCRGAGAG
--GCTCCG-----
 A C T G C T A G A C T G A G T C A C G T A C G T A G T C C T G A A C T G C G T A A C T G C G T A A C T G
A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T

PB0050.1_Osr1_1/Jaspar

Match Rank:5
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--GRGCTTCRGAGAG-
TNNTGCTACTGTNNNN
 A C G T A C G T A C T G C T A G A C T G A G T C A C G T A C G T A G T C C T G A A C T G C G T A A C T G C G T A A C T G A C G T
G A C T C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C T A G A C G T C G T A G C T A C G T A C G A T

Nr2e3/MA0164.1/Jaspar

Match Rank:6
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-GRGCTTCRGAGAG
CAAGCTT-------
 A C G T A C T G C T A G A C T G A G T C A C G T A C G T A G T C C T G A A C T G C G T A A C T G C G T A A C T G
G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0036.1_Irf6_1/Jaspar

Match Rank:7
Score:0.49
Offset:-4
Orientation:reverse strand
Alignment:----GRGCTTCRGAGAG
NNNTTGGTTTCGNTNNN
 A C G T A C G T A C G T A C G T A C T G C T A G A C T G A G T C A C G T A C G T A G T C C T G A A C T G C G T A A C T G C G T A A C T G
G C T A G T A C G C A T A C G T A G C T C T A G A C T G A C G T G C A T A C G T A G T C C T A G C T G A G A C T G A T C G C T A C A T G

ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:GRGCTTCRGAGAG
--ACTTCCGGNT-
 A C T G C T A G A C T G A G T C A C G T A C G T A G T C C T G A A C T G C G T A A C T G C G T A A C T G
A C G T A C G T C T G A A G T C C G A T G A C T A G T C A T G C A C T G A T C G A C G T G A C T A C G T

PB0034.1_Irf4_1/Jaspar

Match Rank:9
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--GRGCTTCRGAGAG
TNTGGTTTCGATACN
 A C G T A C G T A C T G C T A G A C T G A G T C A C G T A C G T A G T C C T G A A C T G C G T A A C T G C G T A A C T G
G C A T A C G T G A C T C T A G A T C G C G A T C G A T A C G T A G T C C T A G C T G A G C A T G C T A G A T C A C T G

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:10
Score:0.48
Offset:0
Orientation:forward strand
Alignment:GRGCTTCRGAGAG
CGGTTTCAAA---
 A C T G C T A G A C T G A G T C A C G T A C G T A G T C C T G A A C T G C G T A A C T G C G T A A C T G
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T