Information for 2-TGCKGGATGAGGC (Motif 4)

A C G T A C T G A T G C A C T G A C T G A C T G C G T A A C G T A C T G T C G A A C T G A C T G A G T C
Reverse Opposite:
A C T G T A G C A G T C A G C T A G T C C G T A A C G T A G T C A G T C T G A C A T C G A G T C C G T A
p-value:1e-13
log p-value:-3.162e+01
Information Content per bp:1.860
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.3 +/- 23.3bp
Average Position of motif in Background50.2 +/- 14.3bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TGCKGGATGAGGC
GTGGGGGAGGGG--
 A C G T A C G T A C T G A T G C A C T G A C T G A C T G C G T A A C G T A C T G T C G A A C T G A C T G A G T C
C T A G G C A T A C T G A C T G C T A G A C T G A C T G G C T A C A T G A C T G C A T G A T C G A C G T A C G T

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TGCKGGATGAGGC
ATGATKGATGRC--
 A C G T A C G T A C T G A T G C A C T G A C T G A C T G C G T A A C G T A C T G T C G A A C T G A C T G A G T C
C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C A C G T A C G T

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.61
Offset:-7
Orientation:forward strand
Alignment:-------TGCKGGATGAGGC
SMCAGTCWGAKGGAGGAGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A C T G A C T G A C T G C G T A A C G T A C T G T C G A A C T G A C T G A G T C
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:4
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TGCKGGATGAGGC-
--MKGGGYGTGGCC
 A C G T A C T G A T G C A C T G A C T G A C T G C G T A A C G T A C T G T C G A A C T G A C T G A G T C A C G T
A C G T A C G T G T A C C A G T A C T G A C T G A C T G G A T C A C T G A C G T A C T G A C T G A G T C G A T C

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TGCKGGATGAGGC
---TGGGTGTGGC
 A C G T A C T G A T G C A C T G A C T G A C T G C G T A A C G T A C T G T C G A A C T G A C T G A G T C
A C G T A C G T A C G T C G A T A C T G A C T G A C T G A G C T A C T G A C G T C T A G C A T G G A T C

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:6
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TGCKGGATGAGGC-
--NTGGGTGTGGCC
 A C G T A C T G A T G C A C T G A C T G A C T G C G T A A C G T A C T G T C G A A C T G A C T G A G T C A C G T
A C G T A C G T T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TGCKGGATGAGGC
-ACAGGATGTGGT
 A C G T A C T G A T G C A C T G A C T G A C T G C G T A A C G T A C T G T C G A A C T G A C T G A G T C
A C G T T C G A T A G C G T C A A C T G C T A G C G T A C G A T A C T G A C G T A C T G A C T G A C G T

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:8
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TGCKGGATGAGGC
---DGGGYGKGGC
 A C G T A C T G A T G C A C T G A C T G A C T G C G T A A C G T A C T G T C G A A C T G A C T G A G T C
A C G T A C G T A C G T C G T A C T A G A C T G A C T G G A C T C T A G C A G T C T A G C A T G G A T C

Klf4/MA0039.2/Jaspar

Match Rank:9
Score:0.57
Offset:3
Orientation:forward strand
Alignment:TGCKGGATGAGGC
---TGGGTGGGGC
 A C G T A C T G A T G C A C T G A C T G A C T G C G T A A C G T A C T G T C G A A C T G A C T G A G T C
A C G T A C G T A C G T C G A T T C A G C T A G A T C G G A C T C A T G A C T G C T A G A C T G A G T C

NFE2/MA0841.1/Jaspar

Match Rank:10
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:TGCKGGATGAGGC---
-----GATGAGTCATN
 A C G T A C T G A T G C A C T G A C T G A C T G C G T A A C G T A C T G T C G A A C T G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G T C G A A C G T C T A G T C G A A T C G C A G T G T A C C T G A A G C T A C T G