Information for 2-GCTTTGHGGT (Motif 3)

C T A G A T G C A C G T A G C T C G A T A T C G G A C T A T C G A T C G A C G T
Reverse Opposite:
T G C A T A G C A T G C C T G A A T G C G C T A T C G A T G C A T A C G A G T C
p-value:1e-14
log p-value:-3.354e+01
Information Content per bp:1.682
Number of Target Sequences with motif93.0
Percentage of Target Sequences with motif10.47%
Number of Background Sequences with motif2014.0
Percentage of Background Sequences with motif4.22%
Average Position of motif in Targets52.3 +/- 29.1bp
Average Position of motif in Background50.9 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX3/MA0684.1/Jaspar

Match Rank:1
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:GCTTTGHGGT--
--TTTGCGGTTT
 C T A G A T G C A C G T A G C T C G A T A T C G G A C T A T C G A T C G A C G T A C G T A C G T
A C G T A C G T C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T

RUNX2/MA0511.2/Jaspar

Match Rank:2
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:GCTTTGHGGT--
---TTGCGGTTT
 C T A G A T G C A C G T A G C T C G A T A T C G G A C T A T C G A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GCTTTGHGGT
CCTTTGATGT
 C T A G A T G C A C G T A G C T C G A T A T C G G A C T A T C G A T C G A C G T
A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:4
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GCTTTGHGGT
CCTTTGAWGT
 C T A G A T G C A C G T A G C T C G A T A T C G G A C T A T C G A T C G A C G T
A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:5
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GCTTTGHGGT--
-GTCTGTGGTTT
 C T A G A T G C A C G T A G C T C G A T A T C G G A C T A T C G A T C G A C G T A C G T A C G T
A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:6
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GCTTTGHGGT---
-NNHTGTGGTTWN
 C T A G A T G C A C G T A G C T C G A T A T C G G A C T A T C G A T C G A C G T A C G T A C G T A C G T
A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:7
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GCTTTGHGGT--
--NNTGTGGTTT
 C T A G A T G C A C G T A G C T C G A T A T C G G A C T A T C G A T C G A C G T A C G T A C G T
A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

SOX10/MA0442.1/Jaspar

Match Rank:8
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GCTTTGHGGT
-CTTTGT---
 C T A G A T G C A C G T A G C T C G A T A T C G G A C T A T C G A T C G A C G T
A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:GCTTTGHGGT---
---CTGTGGTTTN
 C T A G A T G C A C G T A G C T C G A T A T C G G A C T A T C G A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:10
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GCTTTGHGGT
TNCCTTTGATGT
 A C G T A C G T C T A G A T G C A C G T A G C T C G A T A T C G G A C T A T C G A T C G A C G T
C A G T A T G C A G T C A G T C A G C T A C G T A C G T T A C G C G T A C G A T T A C G G A C T