Information for 8-CAGCRGGCCYTCY (Motif 12)

A G T C C G T A C T A G G T A C C T A G A T C G A C T G A G T C G T A C A G T C A G C T A G T C A G C T
Reverse Opposite:
C T G A C T A G T C G A T C A G C A T G C T A G G T A C T A G C G A C T A C T G A G T C G A C T A C T G
p-value:1e-9
log p-value:-2.220e+01
Information Content per bp:1.667
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.14%
Number of Background Sequences with motif154.3
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets47.0 +/- 25.2bp
Average Position of motif in Background51.9 +/- 31.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:1
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---CAGCRGGCCYTCY
DCTCAGCAGG------
 A C G T A C G T A C G T A G T C C G T A C T A G G T A C C T A G A T C G A C T G A G T C G T A C A G T C A G C T A G T C A G C T
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:2
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---CAGCRGGCCYTCY
DCHCAGCAGGRGGCC-
 A C G T A C G T A C G T A G T C C G T A C T A G G T A C C T A G A T C G A C T G A G T C G T A C A G T C A G C T A G T C A G C T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:3
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CAGCRGGCCYTCY
AACAGATGGC-----
 A C G T A C G T A G T C C G T A C T A G G T A C C T A G A T C G A C T G A G T C G T A C A G T C A G C T A G T C A G C T
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:4
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----CAGCRGGCCYTCY
GAGCACAGCAGGACA---
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C T A G G T A C C T A G A T C G A C T G A G T C G T A C A G T C A G C T A G T C A G C T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:5
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----CAGCRGGCCYTCY
CCACACAGCAGGAGA---
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C T A G G T A C C T A G A T C G A C T G A G T C G T A C A G T C A G C T A G T C A G C T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T A C G T

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CAGCRGGCCYTCY
GTCWGCTGTYYCTCT
 A C G T A C G T A G T C C G T A C T A G G T A C C T A G A T C G A C T G A G T C G T A C A G T C A G C T A G T C A G C T
C T A G A C G T A G T C C G T A A C T G A G T C G C A T A C T G G C A T A G T C G A C T G A T C G C A T A G T C A G C T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:7
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----CAGCRGGCCYTCY
VNAVCAGCTGGC-----
 A C G T A C G T A C G T A C G T A G T C C G T A C T A G G T A C C T A G A T C G A C T G A G T C G T A C A G T C A G C T A G T C A G C T
T C A G A C G T T C G A T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C A C G T A C G T A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:8
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----CAGCRGGCCYTCY
CCACACAGCAGGAGA---
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C T A G G T A C C T A G A T C G A C T G A G T C G T A C A G T C A G C T A G T C A G C T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:9
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CAGCRGGCCYTCY
NAACAGCTGG------
 A C G T A C G T A C G T A G T C C G T A C T A G G T A C C T A G A T C G A C T G A G T C G T A C A G T C A G C T A G T C A G C T
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:10
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CAGCRGGCCYTCY
AACAKATGGY-----
 A C G T A C G T A G T C C G T A C T A G G T A C C T A G A T C G A C T G A G T C G T A C A G T C A G C T A G T C A G C T
C T G A T G C A A G T C T C G A A C T G T G C A G C A T A C T G A C T G G A C T A C G T A C G T A C G T A C G T A C G T