Information for 7-ACAGCGCCCTCGG (Motif 8)

T C G A A G T C C G T A A C T G G T A C C T A G A G T C A G T C A G T C A C G T A T G C C A T G A C T G
Reverse Opposite:
T A G C G T A C A T C G G T C A A C T G T A C G A C T G A G T C A C T G A G T C C G A T A C T G A G C T
p-value:1e-16
log p-value:-3.822e+01
Information Content per bp:1.798
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.59%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets60.8 +/- 25.3bp
Average Position of motif in Background69.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0158.1_Rhox11_2/Jaspar

Match Rank:1
Score:0.60
Offset:-7
Orientation:reverse strand
Alignment:-------ACAGCGCCCTCGG
TCNCTTTACAGCGNNNT---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G T C C G T A A C T G G T A C C T A G A G T C A G T C A G T C A C G T A T G C C A T G A C T G
C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T A C G T A C G T A C G T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:2
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--ACAGCGCCCTCGG
NRGCCCCRCCCHBNN
 A C G T A C G T T C G A A G T C C G T A A C T G G T A C C T A G A G T C A G T C A G T C A C G T A T G C C A T G A C T G
G A C T T C A G C T A G A G T C A G T C G T A C A G T C C T G A A G T C A G T C A G T C G A C T A G T C A C T G A T G C

Rhox11/MA0629.1/Jaspar

Match Rank:3
Score:0.60
Offset:-7
Orientation:reverse strand
Alignment:-------ACAGCGCCCTCGG
TCNNTTTACAGCGNNNT---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G T C C G T A A C T G G T A C C T A G A G T C A G T C A G T C A C G T A T G C C A T G A C T G
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T A C G T A C G T A C G T

PH0157.1_Rhox11_1/Jaspar

Match Rank:4
Score:0.60
Offset:-7
Orientation:reverse strand
Alignment:-------ACAGCGCCCTCGG
TCNNTTTACAGCGNNNT---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G T C C G T A A C T G G T A C C T A G A G T C A G T C A G T C A C G T A T G C C A T G A C T G
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T A C G T A C G T A C G T

HINFP/MA0131.2/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:ACAGCGCCCTCGG
-CAACGTCCGCGG
 T C G A A G T C C G T A A C T G G T A C C T A G A G T C A G T C A G T C A C G T A T G C C A T G A C T G
A C G T A T G C T G C A T C G A A T G C A T C G A C G T A T G C A G T C A T C G A T G C C A T G A C T G

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-ACAGCGCCCTCGG
CACAGN--------
 A C G T T C G A A G T C C G T A A C T G G T A C C T A G A G T C A G T C A G T C A C G T A T G C C A T G A C T G
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:ACAGCGCCCTCGG
GCTCCGCCCMCY-
 T C G A A G T C C G T A A C T G G T A C C T A G A G T C A G T C A G T C A C G T A T G C C A T G A C T G
C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T A C G T

PB0039.1_Klf7_1/Jaspar

Match Rank:8
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---ACAGCGCCCTCGG
TCGACCCCGCCCCTAT
 A C G T A C G T A C G T T C G A A G T C C G T A A C T G G T A C C T A G A G T C A G T C A G T C A C G T A T G C C A T G A C T G
G A C T A G T C C T A G T C G A G T A C G T A C T G A C G A T C C T A G A G T C A G T C A G T C G A T C G A C T G C T A C G A T

POL006.1_BREu/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:ACAGCGCCCTCGG
AGCGCGCC-----
 T C G A A G T C C G T A A C T G G T A C C T A G A G T C A G T C A G T C A C G T A T G C C A T G A C T G
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--ACAGCGCCCTCGG-----
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T T C G A A G T C C G T A A C T G G T A C C T A G A G T C A G T C A G T C A C G T A T G C C A T G A C T G A C G T A C G T A C G T A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C