Information for 3-CACASTACATTTCCCA (Motif 21)

T A G C C G T A T A G C C G T A A T G C A C G T G T C A A T G C C G T A A C G T A C G T A C G T A G T C G A T C G T A C T C G A
Reverse Opposite:
A C G T A C T G C A T G C T A G G T C A T G C A T G C A G C A T A T C G A C G T G T C A T A C G G C A T A C T G C G A T A T C G
p-value:1e-13
log p-value:-3.078e+01
Information Content per bp:1.707
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.34%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.8 +/- 23.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)3.5
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.68
Offset:3
Orientation:forward strand
Alignment:CACASTACATTTCCCA
---ACTACAATTCCC-
 T A G C C G T A T A G C C G T A A T G C A C G T G T C A A T G C C G T A A C G T A C G T A C G T A G T C G A T C G T A C T C G A
A C G T A C G T A C G T T G C A T A G C G A C T T G C A T G A C T G C A C G T A A G C T A G C T A G T C A G T C G T A C A C G T

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:2
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CACASTACATTTCCCA------
--AACTACAATTCCCAGAATGC
 T A G C C G T A T A G C C G T A A T G C A C G T G T C A A T G C C G T A A C G T A C G T A C G T A G T C G A T C G T A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C G A C G T A A G T C A G C T C G T A A G T C T C G A G C T A G A C T C G A T A G T C A G T C A G T C C T G A T C A G T G C A T C G A C A G T A T C G A G T C

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:3
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CACASTACATTTCCCA------
--RACTACAACTCCCAGVAKGC
 T A G C C G T A T A G C C G T A A T G C A C G T G T C A A T G C C G T A A C G T A C G T A C G T A G T C G A T C G T A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C A G C G T A A G T C A G C T C G T A A G T C C T G A C G T A A G T C G C A T A G T C A G T C A G T C C T G A A C T G T G C A T C G A C A T G A T C G G A T C

PH0085.1_Irx4/Jaspar

Match Rank:4
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CACASTACATTTCCCA--
-AATATACATGTAAAACA
 T A G C C G T A T A G C C G T A A T G C A C G T G T C A A T G C C G T A A C G T A C G T A C G T A G T C G A T C G T A C T C G A A C G T A C G T
A C G T C G T A C G T A G C A T C T G A C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G T C A C G T A C G T A A G T C C G T A

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:5
Score:0.52
Offset:8
Orientation:forward strand
Alignment:CACASTACATTTCCCA--
--------HTTTCCCASG
 T A G C C G T A T A G C C G T A A T G C A C G T G T C A A T G C C G T A A C G T A C G T A C G T A G T C G A T C G T A C T C G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G

PH0084.1_Irx3_2/Jaspar

Match Rank:6
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:CACASTACATTTCCCA-
NNTATTACATGTANNNT
 T A G C C G T A T A G C C G T A A T G C A C G T G T C A A T G C C G T A A C G T A C G T A C G T A G T C G A T C G T A C T C G A A C G T
G C A T C T G A G C A T G C T A A C G T C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A C G A T G C T A G C A T G C A T

PB0208.1_Zscan4_2/Jaspar

Match Rank:7
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----CACASTACATTTCCCA
CGAAGCACACAAAATA-----
 A C G T A C G T A C G T A C G T A C G T T A G C C G T A T A G C C G T A A T G C A C G T G T C A A T G C C G T A A C G T A C G T A C G T A G T C G A T C G T A C T C G A
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A A C G T A C G T A C G T A C G T A C G T

PH0086.1_Irx5/Jaspar

Match Rank:8
Score:0.51
Offset:1
Orientation:forward strand
Alignment:CACASTACATTTCCCA--
-AATATACATGTAAAATT
 T A G C C G T A T A G C C G T A A T G C A C G T G T C A A T G C C G T A A C G T A C G T A C G T A G T C G A T C G T A C T C G A A C G T A C G T
A C G T C G A T C G T A C G A T G C T A C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A G T C A C G T A C G T A A C G T C G A T

PH0087.1_Irx6/Jaspar

Match Rank:9
Score:0.51
Offset:1
Orientation:forward strand
Alignment:CACASTACATTTCCCA--
-AAAATACATGTAAAAAT
 T A G C C G T A T A G C C G T A A T G C A C G T G T C A A T G C C G T A A C G T A C G T A C G T A G T C G A T C G T A C T C G A A C G T A C G T
A C G T G C T A G C T A G C T A C T G A C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G T C A C G T A C G T A G C T A C G A T

PH0083.1_Irx3_1/Jaspar

Match Rank:10
Score:0.51
Offset:1
Orientation:forward strand
Alignment:CACASTACATTTCCCA--
-AAAATACATGTAATACT
 T A G C C G T A T A G C C G T A A T G C A C G T G T C A A T G C C G T A A C G T A C G T A C G T A G T C G A T C G T A C T C G A A C G T A C G T
A C G T C G T A C T G A C G A T C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A T G C A C G A T C G T A G A T C C G A T