Information for 13-TTGKTDSCAGRAA (Motif 16)

A C G T G A C T C A T G C A G T C G A T C A T G A T G C G T A C G T C A A C T G C T A G T G C A C G T A
Reverse Opposite:
C G A T A C G T A G T C G T A C A C G T A C T G A T C G G T A C C G T A G T C A G T A C C T G A C G T A
p-value:1e-14
log p-value:-3.394e+01
Information Content per bp:1.656
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.20%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets44.3 +/- 25.4bp
Average Position of motif in Background55.5 +/- 16.7bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:1
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TTGKTDSCAGRAA---
--NCTTCCNGGAAGNN
 A C G T G A C T C A T G C A G T C G A T C A T G A T G C G T A C G T C A A C T G C T A G T G C A C G T A A C G T A C G T A C G T
A C G T A C G T T C A G A G T C G A C T A C G T G T A C A G T C C G A T C T A G C A T G G T C A C T G A T C A G A G C T T A C G

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:2
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TTGKTDSCAGRAA-
--NTTTCCNGGAAA
 A C G T G A C T C A T G C A G T C G A T C A T G A T G C G T A C G T C A A C T G C T A G T G C A C G T A A C G T
A C G T A C G T T C A G A G C T A C G T A C G T G T A C G A T C C G T A C T A G C A T G G T C A C G T A T C G A

STAT1/MA0137.3/Jaspar

Match Rank:3
Score:0.59
Offset:3
Orientation:forward strand
Alignment:TTGKTDSCAGRAA-
---TTTCCAGGAAA
 A C G T G A C T C A T G C A G T C G A T C A T G A T G C G T A C G T C A A C T G C T A G T G C A C G T A A C G T
A C G T A C G T A C G T A C G T A G C T A C G T T G A C G A T C C T G A C T A G C A T G C T G A G T C A C T G A

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TTGKTDSCAGRAA-
NNNCTTTCCAGGAAA
 A C G T A C G T G A C T C A T G C A G T C G A T C A T G A T G C G T A C G T C A A C T G C T A G T G C A C G T A A C G T
G A C T C G A T T C A G G A T C G A C T A G C T A G C T A G T C G A T C C G T A C T A G C T A G T C G A T C G A C T G A

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:TTGKTDSCAGRAA-
----TTCCNGGAAG
 A C G T G A C T C A T G C A G T C G A T C A T G A T G C G T A C G T C A A C T G C T A G T G C A C G T A A C G T
A C G T A C G T A C G T A C G T G C A T C A G T T G A C A G T C T A G C T C A G C A T G G T C A C T G A T C A G

Stat4/MA0518.1/Jaspar

Match Rank:6
Score:0.59
Offset:3
Orientation:forward strand
Alignment:TTGKTDSCAGRAA----
---TTTCCAGGAAATGG
 A C G T G A C T C A T G C A G T C G A T C A T G A T G C G T A C G T C A A C T G C T A G T G C A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T G C A T C A G T T G A C G A T C C T G A C T A G C T A G C G T A C G T A T C G A A G C T T A C G T C A G

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TTGKTDSCAGRAA---
-KGTTGCTAGGMAACA
 A C G T G A C T C A T G C A G T C G A T C A T G A T G C G T A C G T C A A C T G C T A G T G C A C G T A A C G T A C G T A C G T
A C G T C A T G A C T G A G C T C G A T C T A G A G T C A G C T C T G A C T A G A C T G T G C A C T G A T C G A A G T C G T C A

Bcl6/MA0463.1/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TTGKTDSCAGRAA-
NGCTTTCTAGGAAN
 A C G T G A C T C A T G C A G T C G A T C A T G A T G C G T A C G T C A A C T G C T A G T G C A C G T A A C G T
C G A T C A T G G T A C G A C T A G C T G A C T A G T C A G C T C G T A C T A G C A T G T C G A G C T A G T C A

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TTGKTDSCAGRAA
CTGTTGCTAGGS-
 A C G T G A C T C A T G C A G T C G A T C A T G A T G C G T A C G T C A A C T G C T A G T G C A C G T A
A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G A C G T

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:10
Score:0.56
Offset:5
Orientation:forward strand
Alignment:TTGKTDSCAGRAA--
-----AVCAGGAAGT
 A C G T G A C T C A T G C A G T C G A T C A T G A T G C G T A C G T C A A C T G C T A G T G C A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A T A G C T A G C T G C A A C T G C T A G C G T A C G T A T C A G G A C T