Information for 11-TCAGGCAACT (Motif 13)

A C G T A G T C C G T A A C T G A C T G G T A C G T C A C T G A A G T C A C G T
Reverse Opposite:
C G T A A C T G A G C T A C G T A C T G G T A C G T A C A C G T C T A G C G T A
p-value:1e-14
log p-value:-3.446e+01
Information Content per bp:1.864
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.46%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets50.2 +/- 30.9bp
Average Position of motif in Background49.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.68
Offset:1
Orientation:forward strand
Alignment:TCAGGCAACT--
-AAGGCAAGTGT
 A C G T A G T C C G T A A C T G A C T G G T A C G T C A C T G A A G T C A C G T A C G T A C G T
A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TCAGGCAACT
CNGTCACGCCAC-
 A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C T G G T A C G T C A C T G A A G T C A C G T
G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C A C G T

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TCAGGCAACT
RTTATGYAAB-
 A C G T A C G T A G T C C G T A A C T G A C T G G T A C G T C A C T G A A G T C A C G T
T C A G G A C T C A G T C T G A A G C T C T A G G A C T T G C A C T G A A G T C A C G T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TCAGGCAACT
MTGATGCAAT-
 A C G T A C G T A G T C C G T A A C T G A C T G G T A C G T C A C T G A A G T C A C G T
T G C A A G C T C A T G C G T A A G C T A C T G G A T C G T C A C G T A A G C T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TCAGGCAACT
TTATGCAAAT
 A C G T A G T C C G T A A C T G A C T G G T A C G T C A C T G A A G T C A C G T
C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TCAGGCAACT
TTATGCAAT-
 A C G T A G T C C G T A A C T G A C T G G T A C G T C A C T G A A G T C A C G T
C G A T C A G T C T G A A G C T C T A G G A T C T G C A C T G A A G C T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TCAGGCAACT---
ATATGCAAATNNN
 A C G T A G T C C G T A A C T G A C T G G T A C G T C A C T G A A G T C A C G T A C G T A C G T A C G T
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TCAGGCAACT
ATGATGCAAT-
 A C G T A C G T A G T C C G T A A C T G A C T G G T A C G T C A C T G A A G T C A C G T
T G C A A G C T A C T G C G T A A G C T C A T G G A T C T G C A C G T A A G C T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TCAGGCAACT
TBGCACGCAA--
 A C G T A C G T A C G T A G T C C G T A A C T G A C T G G T A C G T C A C T G A A G T C A C G T
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TCAGGCAACT
NACAGGAAAT-
 A C G T A C G T A G T C C G T A A C T G A C T G G T A C G T C A C T G A A G T C A C G T
T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T