Information for 10-TCCASACACAGBR (Motif 10)

A G C T T A G C A G T C G T C A A T G C G T C A G T A C T G C A A G T C C G T A A T C G A G T C C T G A
Reverse Opposite:
A G C T T C A G A T G C C G A T T C A G A C G T A C T G A C G T A T C G A C G T A C T G A T C G C T G A
p-value:1e-15
log p-value:-3.584e+01
Information Content per bp:1.639
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.07%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets48.1 +/- 22.4bp
Average Position of motif in Background54.4 +/- 23.4bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TCCASACACAGBR
-CCAGACRSVB--
A G C T T A G C A G T C G T C A A T G C G T C A G T A C T G C A A G T C C G T A A T C G A G T C C T G A
A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TCCASACACAGBR
-CCAGACAG----
A G C T T A G C A G T C G T C A A T G C G T C A G T A C T G C A A G T C C G T A A T C G A G T C C T G A
A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TCCASACACAGBR
GGCCACACCCAN--
A C G T A G C T T A G C A G T C G T C A A T G C G T C A G T A C T G C A A G T C C G T A A T C G A G T C C T G A
C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----TCCASACACAGBR
CAAATCCAGACATCACA
A C G T A C G T A C G T A C G T A G C T T A G C A G T C G T C A A T G C G T C A G T A C T G C A A G T C C G T A A T C G A G T C C T G A
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TCCASACACAGBR
GCCACACCCA---
A G C T T A G C A G T C G T C A A T G C G T C A G T A C T G C A A G T C C G T A A T C G A G T C C T G A
C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T A C G T

Klf1/MA0493.1/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TCCASACACAGBR
GGCCACACCCA---
A C G T A G C T T A G C A G T C G T C A A T G C G T C A G T A C T G C A A G T C C G T A A T C G A G T C C T G A
C T A G T C A G T G A C G A T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TCCASACACAGBR
ATCCAC--------
A C G T A G C T T A G C A G T C G T C A A T G C G T C A G T A C T G C A A G T C C G T A A T C G A G T C C T G A
T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TCCASACACAGBR
ATGCCAGACN-----
A C G T A C G T A G C T T A G C A G T C G T C A A T G C G T C A G T A C T G C A A G T C C G T A A T C G A G T C C T G A
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TCCASACACAGBR
-BCAGACWA----
A G C T T A G C A G T C G T C A A T G C G T C A G T A C T G C A A G T C C G T A A T C G A G T C C T G A
A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---TCCASACACAGBR
AGCGGCACACACGCAA
A C G T A C G T A C G T A G C T T A G C A G T C G T C A A T G C G T C A G T A C T G C A A G T C C G T A A T C G A G T C C T G A
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A