Information for 13-CTTAAATGAC (Motif 37)

A G T C A C G T A C G T C G T A C G T A G T C A A C G T A C T G C G T A A G T C
Reverse Opposite:
A C T G A C G T A G T C C G T A A C G T A C G T A C G T C G T A C G T A A C T G
p-value:1e-3
log p-value:-7.308e+00
Information Content per bp:1.959
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.42%
Number of Background Sequences with motif11.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets30.4 +/- 22.1bp
Average Position of motif in Background53.2 +/- 33.4bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BARHL2/MA0635.1/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CTTAAATGAC
GCTAAACGGT
 A G T C A C G T A C G T C G T A C G T A G T C A A C G T A C T G C G T A A G T C
T A C G G A T C C G A T C G T A C G T A C G T A G A T C C T A G T C A G G A C T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:2
Score:0.66
Offset:4
Orientation:forward strand
Alignment:CTTAAATGAC
----CATGAC
 A G T C A C G T A C G T C G T A C G T A G T C A A C G T A C T G C G T A A G T C
A C G T A C G T A C G T A C G T T A G C T C G A A C G T C A T G C G T A A G T C

Barhl1/MA0877.1/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CTTAAATGAC
GCTAATTGCT
 A G T C A C G T A C G T C G T A C G T A G T C A A C G T A C T G C G T A A G T C
A T C G G A T C G C A T C G T A C T G A C G A T A G C T C T A G A T G C A G C T

ISL2/MA0914.1/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CTTAAATGAC
-TTAAGTGC-
 A G T C A C G T A C G T C G T A C G T A G T C A A C G T A C T G C G T A A G T C
A C G T G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C A C G T

Nkx2-5/MA0063.1/Jaspar

Match Rank:5
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CTTAAATGAC
-TTAATTG--
 A G T C A C G T A C G T C G T A C G T A G T C A A C G T A C T G C G T A A G T C
A C G T C G A T A G C T C G T A C G T A A C G T G C A T C A T G A C G T A C G T

PB0005.1_Bbx_1/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CTTAAATGAC---
NANTTCATTGAATTA
 A C G T A C G T A G T C A C G T A C G T C G T A C G T A G T C A A C G T A C T G C G T A A G T C A C G T A C G T A C G T
G A T C C G T A T A G C C G A T C G A T T G A C G C T A G C A T C G A T A C T G C G T A G C T A G A C T C G A T C G T A

Myb/MA0100.2/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CTTAAATGAC-
-CCAACTGCCA
 A G T C A C G T A C G T C G T A C G T A G T C A A C G T A C T G C G T A A G T C A C G T
A C G T A G T C G A T C C G T A C T G A A G T C C G A T A C T G G A T C G T A C G C T A

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:8
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CTTAAATGAC
-CTAATKGV-
 A G T C A C G T A C G T C G T A C G T A G T C A A C G T A C T G C G T A A G T C
A C G T A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C A C G T

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:9
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CTTAAATGAC-
TGWCCTCARNTGACC
 A C G T A C G T A C G T A C G T A G T C A C G T A C G T C G T A C G T A G T C A A C G T A C T G C G T A A G T C A C G T
G C A T T A C G C G T A G T A C A G T C G A C T A G T C T C G A T C A G T C G A C G A T T C A G T G C A G T A C G A T C

NKX3-2/MA0122.2/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CTTAAATGAC
-TTAAGTGGN
 A G T C A C G T A C G T C G T A C G T A G T C A A C G T A C T G C G T A A G T C
A C G T G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T