Information for 24-YCTTKCTTTCTCT (Motif 36)

A G T C G T A C C G A T G C A T A C G T A G T C G C A T A C G T A G C T A G T C A G C T A G T C G A C T
Reverse Opposite:
C T G A T A C G C T G A C T A G T C G A T G C A C G T A C T A G G T C A C G T A C G T A A C T G T C A G
p-value:1e-3
log p-value:-8.900e+00
Information Content per bp:1.709
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.11%
Number of Background Sequences with motif318.2
Percentage of Background Sequences with motif0.67%
Average Position of motif in Targets48.5 +/- 24.4bp
Average Position of motif in Background47.8 +/- 30.3bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0166.1_Sox12_2/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:YCTTKCTTTCTCT----
-ANTCCTTTGTCTNNNN
 A G T C G T A C C G A T G C A T A C G T A G T C G C A T A C G T A G C T A G T C A G C T A G T C G A C T A C G T A C G T A C G T A C G T
A C G T C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.62
Offset:4
Orientation:forward strand
Alignment:YCTTKCTTTCTCT---
----ACTTTCACTTTC
 A G T C G T A C C G A T G C A T A C G T A G T C G C A T A C G T A G C T A G T C A G C T A G T C G A C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:YCTTKCTTTCTCT
ACTTTCACTTTC-
 A G T C G T A C C G A T G C A T A C G T A G T C G C A T A C G T A G C T A G T C A G C T A G T C G A C T
C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C A C G T

PRDM1/MA0508.1/Jaspar

Match Rank:4
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:YCTTKCTTTCTCT----
--TCACTTTCACTTTCN
 A G T C G T A C C G A T G C A T A C G T A G T C G C A T A C G T A G C T A G T C A G C T A G T C G A C T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T G A T C T G C A A G T C G C A T G A C T A C G T A G T C G T C A G A T C A G C T A G C T G A C T G A T C G C A T

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:5
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:YCTTKCTTTCTCT
RSTTTCRSTTTC-
 A G T C G T A C C G A T G C A T A C G T A G T C G C A T A C G T A G C T A G T C A G C T A G T C G A C T
T C G A A T G C A C G T A C G T A G C T A G T C C T G A A T G C G C A T G A C T A G C T G A T C A C G T

IRF1/MA0050.2/Jaspar

Match Rank:6
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----YCTTKCTTTCTCT----
TTTTACTTTCACTTTCACTTT
 A C G T A C G T A C G T A C G T A G T C G T A C C G A T G C A T A C G T A G T C G C A T A C G T A G C T A G T C A G C T A G T C G A C T A C G T A C G T A C G T A C G T
G A C T A G C T A G C T A G C T C T G A A T G C C G A T A G C T A G C T A G T C C T G A A T G C G C A T G A C T G A C T A G T C C G T A A G T C G A C T G C A T G A C T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:7
Score:0.54
Offset:0
Orientation:forward strand
Alignment:YCTTKCTTTCTCT
AGTTTCAGTTTC-
 A G T C G T A C C G A T G C A T A C G T A G T C G C A T A C G T A G C T A G T C A G C T A G T C G A C T
C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C A C G T

Sox3/MA0514.1/Jaspar

Match Rank:8
Score:0.52
Offset:0
Orientation:forward strand
Alignment:YCTTKCTTTCTCT
CCTTTGTTTT---
 A G T C G T A C C G A T G C A T A C G T A G T C G C A T A C G T A G C T A G T C A G C T A G T C G A C T
A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T A C G T A C G T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:9
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--YCTTKCTTTCTCT
TCAGTTTCATTTTCC
 A C G T A C G T A G T C G T A C C G A T G C A T A C G T A G T C G C A T A C G T A G C T A G T C A G C T A G T C G A C T
C A G T G A T C C T G A T A C G A G C T G C A T A G C T A G T C C T G A A C G T A G C T G C A T A G C T G A T C A G T C

SPIC/MA0687.1/Jaspar

Match Rank:10
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:YCTTKCTTTCTCT----
---TACTTCCTCTTTTN
 A G T C G T A C C G A T G C A T A C G T A G T C G C A T A C G T A G C T A G T C A G C T A G T C G A C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T C G T A A G T C A C G T C G A T G T A C T A G C A C G T A T G C C G A T C A G T C A G T G A C T C A G T