Information for 20-AAAAAGCAACAACAAC (Motif 33)

C T G A G T C A G T C A C G T A T C G A C T A G G A T C G T C A C G T A G T A C C G T A C G T A A T G C G T C A C G T A A T G C
Reverse Opposite:
A T C G A C G T A C G T A T C G A C G T A C G T A C T G A C G T A C G T C T A G A G T C A G C T C G A T A C G T A C G T A G C T
p-value:1e-6
log p-value:-1.428e+01
Information Content per bp:1.788
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.27%
Number of Background Sequences with motif62.6
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets55.3 +/- 25.0bp
Average Position of motif in Background56.6 +/- 25.2bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0093.1_Zfp105_1/Jaspar

Match Rank:1
Score:0.74
Offset:0
Orientation:forward strand
Alignment:AAAAAGCAACAACAAC
AACAAACAACAAGAG-
 C T G A G T C A G T C A C G T A T C G A C T A G G A T C G T C A C G T A G T A C C G T A C G T A A T G C G T C A C G T A A T G C
G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:2
Score:0.73
Offset:2
Orientation:forward strand
Alignment:AAAAAGCAACAACAAC-
--CAAACAACAACACCT
 C T G A G T C A G T C A C G T A T C G A C T A G G A T C G T C A C G T A G T A C C G T A C G T A A T G C G T C A C G T A A T G C A C G T
A C G T A C G T G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T

PB0120.1_Foxj1_2/Jaspar

Match Rank:3
Score:0.66
Offset:3
Orientation:forward strand
Alignment:AAAAAGCAACAACAAC--
---ATGTCACAACAACAC
 C T G A G T C A G T C A C G T A T C G A C T A G G A T C G T C A C G T A G T A C C G T A C G T A A T G C G T C A C G T A A T G C A C G T A C G T
A C G T A C G T A C G T C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C

PB0119.1_Foxa2_2/Jaspar

Match Rank:4
Score:0.66
Offset:1
Orientation:forward strand
Alignment:AAAAAGCAACAACAAC
-AAAAATAACAAACGG
 C T G A G T C A G T C A C G T A T C G A C T A G G A T C G T C A C G T A G T A C C G T A C G T A A T G C G T C A C G T A A T G C
A C G T T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

PB0062.1_Sox12_1/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AAAAAGCAACAACAAC
-NTTNAGAACAATTA-
 C T G A G T C A G T C A C G T A T C G A C T A G G A T C G T C A C G T A G T A C C G T A C G T A A T G C G T C A C G T A A T G C
A C G T C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A A C G T

PB0123.1_Foxl1_2/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AAAAAGCAACAACAAC
ATATCAAAACAAAACA
 C T G A G T C A G T C A C G T A T C G A C T A G G A T C G T C A C G T A G T A C C G T A C G T A A T G C G T C A C G T A A T G C
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

PB0172.1_Sox1_2/Jaspar

Match Rank:7
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:AAAAAGCAACAACAAC--
---NNNTAACAATTATAN
 C T G A G T C A G T C A C G T A T C G A C T A G G A T C G T C A C G T A G T A C C G T A C G T A A T G C G T C A C G T A A T G C A C G T A C G T
A C G T A C G T A C G T A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G

MF0011.1_HMG_class/Jaspar

Match Rank:8
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:AAAAAGCAACAACAAC
-------AACAAT---
 C T G A G T C A G T C A C G T A T C G A C T A G G A T C G T C A C G T A G T A C C G T A C G T A A T G C G T C A C G T A A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:AAAAAGCAACAACAAC
--AAACAAACATTC--
 C T G A G T C A G T C A C G T A T C G A C T A G G A T C G T C A C G T A G T A C C G T A C G T A A T G C G T C A C G T A A T G C
A C G T A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:10
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:AAAAAGCAACAACAAC
-----RNAACAATGG-
 C T G A G T C A G T C A C G T A T C G A C T A G G A T C G T C A C G T A G T A C C G T A C G T A A T G C G T C A C G T A A T G C
A C G T A C G T A C G T A C G T A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G A C G T