Information for 10-TCGGTAACTG (Motif 28)

A C G T A G T C A C T G A T C G C G A T G T C A C G T A A G T C A C G T A C T G
Reverse Opposite:
A G T C C G T A C T A G A C G T A C G T C G T A A T G C A G T C A C T G C G T A
p-value:1e-7
log p-value:-1.654e+01
Information Content per bp:1.953
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif13.5
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets40.8 +/- 36.5bp
Average Position of motif in Background59.5 +/- 22.3bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:1
Score:0.64
Offset:3
Orientation:forward strand
Alignment:TCGGTAACTG---
---NHAACBGYYV
 A C G T A G T C A C T G A T C G C G A T G T C A C G T A A G T C A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G C A T C G T A C G T A G T A C A C G T A C T G G A T C G A T C T C G A

Myb/MA0100.2/Jaspar

Match Rank:2
Score:0.60
Offset:3
Orientation:forward strand
Alignment:TCGGTAACTG---
---CCAACTGCCA
 A C G T A G T C A C T G A T C G C G A T G T C A C G T A A G T C A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G A T C C G T A C T G A A G T C C G A T A C T G G A T C G T A C G C T A

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:3
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:TCGGTAACTG--
----YAACBGCC
 A C G T A G T C A C T G A T C G C G A T G T C A C G T A A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A G C T C G T A C G T A A G T C A G T C A C T G G A T C G A T C

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:4
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TCGGTAACTG---
---CCAACTGCCA
 A C G T A G T C A C T G A T C G C G A T G T C A C G T A A G T C A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G A T C C G T A C G T A A G T C A C G T A C T G G A T C G A T C C T G A

MYBL1/MA0776.1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TCGGTAACTG-
ACCGTTAACGGT
 A C G T A C G T A G T C A C T G A T C G C G A T G T C A C G T A A G T C A C G T A C T G A C G T
C T G A T G A C T A G C T C A G G A C T G C A T C G T A T C G A G T A C A T C G C A T G G A C T

HMBOX1/MA0895.1/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TCGGTAACTG--
--GTTAACTAGN
 A C G T A G T C A C T G A T C G C G A T G T C A C G T A A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T

Barhl1/MA0877.1/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TCGGTAACTG--
--GCTAATTGCT
 A C G T A G T C A C T G A T C G C G A T G T C A C G T A A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A T C G G A T C G C A T C G T A C T G A C G A T A G C T C T A G A T G C A G C T

PH0167.1_Tcf1/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TCGGTAACTG----
CCTTAGTTAACTAAAAT
 A C G T A C G T A C G T A C G T A G T C A C T G A T C G C G A T G T C A C G T A A G T C A C G T A C T G A C G T A C G T A C G T A C G T
G A T C A T G C A C G T A G C T T C A G A T C G G A C T G C A T C G T A C G T A A T G C G A C T C T G A T G C A C G T A C T G A A C G T

PB0159.1_Rfx4_2/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TCGGTAACTG-----
NNNGTAACTANGNNA
 A C G T A G T C A C T G A T C G C G A T G T C A C G T A A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A T G C A T C G A C T G G A C T G T C A C G T A G T A C A G C T G C T A C A T G A T C G T A C G C A G T C G T A

PB0081.1_Tcf1_1/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TCGGTAACTG----
ACTTAGTTAACTAAAAA
 A C G T A C G T A C G T A C G T A G T C A C T G A T C G C G A T G T C A C G T A A G T C A C G T A C T G A C G T A C G T A C G T A C G T
T G C A G A T C A G C T G A C T T C G A C T A G G A C T C G A T G C T A C G T A A G T C G A C T C T G A T C G A C T G A G T C A C T G A