Information for 17-TGGGAGSCCAKWGTRC (Motif 24)

A C G T A C T G C A T G A C T G C G T A A C T G A T C G T G A C A T G C C G T A A C G T C G A T A C T G C A G T C T A G A T G C
Reverse Opposite:
A T C G G A C T G T C A A G T C C G T A G T C A C G A T A T C G A C T G A T G C A G T C A C G T A G T C G T A C A G T C C G T A
p-value:1e-7
log p-value:-1.755e+01
Information Content per bp:1.759
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif19.6
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets41.1 +/- 16.8bp
Average Position of motif in Background51.5 +/- 25.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TGGGAGSCCAKWGTRC
-GGGAGGACNG-----
 A C G T A C T G C A T G A C T G C G T A A C T G A T C G T G A C A T G C C G T A A C G T C G A T A C T G C A G T C T A G A T G C
A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T A C G T A C G T A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:2
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TGGGAGSCCAKWGTRC
NNNNTGAGCACTGTNNG-
 A C G T A C G T A C G T A C T G C A T G A C T G C G T A A C T G A T C G T G A C A T G C C G T A A C G T C G A T A C T G C A G T C T A G A T G C
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:3
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TGGGAGSCCAKWGTRC
CTTGAGTGGCT-------
 A C G T A C G T A C G T A C T G C A T G A C T G C G T A A C T G A T C G T G A C A T G C C G T A A C G T C G A T A C T G C A G T C T A G A T G C
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:4
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:TGGGAGSCCAKWGTRC
-CGGAGC---------
 A C G T A C T G C A T G A C T G C G T A A C T G A T C G T G A C A T G C C G T A A C G T C G A T A C T G C A G T C T A G A T G C
A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:5
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:TGGGAGSCCAKWGTRC-
---NAGGTCANTGACCT
 A C G T A C T G C A T G A C T G C G T A A C T G A T C G T G A C A T G C C G T A A C G T C G A T A C T G C A G T C T A G A T G C A C G T
A C G T A C G T A C G T T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T

HNF4G/MA0484.1/Jaspar

Match Rank:6
Score:0.51
Offset:2
Orientation:forward strand
Alignment:TGGGAGSCCAKWGTRC-
--AGAGTCCAAAGTCCA
 A C G T A C T G C A T G A C T G C G T A A C T G A T C G T G A C A T G C C G T A A C G T C G A T A C T G C A G T C T A G A T G C A C G T
A C G T A C G T C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--TGGGAGSCCAKWGTRC
CSTGGGAAAD--------
 A C G T A C G T A C G T A C T G C A T G A C T G C G T A A C T G A T C G T G A C A T G C C G T A A C G T C G A T A C T G C A G T C T A G A T G C
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:8
Score:0.50
Offset:2
Orientation:forward strand
Alignment:TGGGAGSCCAKWGTRC
--AGGVNCCTTTGT--
 A C G T A C T G C A T G A C T G C G T A A C T G A T C G T G A C A T G C C G T A A C G T C G A T A C T G C A G T C T A G A T G C
A C G T A C G T C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T A C G T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:9
Score:0.50
Offset:3
Orientation:forward strand
Alignment:TGGGAGSCCAKWGTRC-
---GAGGTCAAAGGTCA
 A C G T A C T G C A T G A C T G C G T A A C T G A T C G T G A C A T G C C G T A A C G T C G A T A C T G C A G T C T A G A T G C A C G T
A C G T A C G T A C G T T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:10
Score:0.50
Offset:1
Orientation:forward strand
Alignment:TGGGAGSCCAKWGTRC-
-CANAGNNCAAAGTCCA
 A C G T A C T G C A T G A C T G C G T A A C T G A T C G T G A C A T G C C G T A A C G T C G A T A C T G C A G T C T A G A T G C A C G T
A C G T G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A