Information for 14-GATCTACATTGTAVAT (Motif 20)

C A T G C G T A A G C T A T G C A C G T G T C A A G T C C T G A C G A T A C G T A C T G A C G T C G T A T A G C C G T A A C G T
Reverse Opposite:
G T C A A C G T A T C G A C G T C G T A G T A C C G T A C G T A A G C T A C T G A C G T C G T A A T C G C T G A A C G T G T A C
p-value:1e-8
log p-value:-1.998e+01
Information Content per bp:1.795
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.2 +/- 23.1bp
Average Position of motif in Background27.0 +/- 10.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0132.1_Hbp1_2/Jaspar

Match Rank:1
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GATCTACATTGTAVAT-
TGTTCCCATTGTGTACT
 C A T G C G T A A G C T A T G C A C G T G T C A A G T C C T G A C G A T A C G T A C T G A C G T C G T A T A G C C G T A A C G T A C G T
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T

SOX10/MA0442.1/Jaspar

Match Rank:2
Score:0.57
Offset:6
Orientation:forward strand
Alignment:GATCTACATTGTAVAT
------CTTTGT----
 C A T G C G T A A G C T A T G C A C G T G T C A A G T C C T G A C G A T A C G T A C T G A C G T C G T A T A G C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:3
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GATCTACATTGTAVAT
YDGHTACAWTGTADC-
 C A T G C G T A A G C T A T G C A C G T G T C A A G T C C T G A C G A T A C G T A C T G A C G T C G T A T A G C C G T A A C G T
G A C T C G A T C A T G G C T A G C A T C G T A A G T C G C T A G C A T C G A T T A C G G C A T C G T A C A G T G A T C A C G T

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:4
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GATCTACATTGTAVAT
TWGHWACAWTGTWDC-
 C A T G C G T A A G C T A T G C A C G T G T C A A G T C C T G A C G A T A C G T A C T G A C G T C G T A T A G C C G T A A C G T
G C A T C G A T C T A G G C T A G C A T C G T A G A T C G C T A C G A T C G A T C T A G C G A T C G T A C G A T G A T C A C G T

PB0070.1_Sox30_1/Jaspar

Match Rank:5
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GATCTACATTGTAVAT-
-ANNTCCATTGTTCNNN
 C A T G C G T A A G C T A T G C A C G T G T C A A G T C C T G A C G A T A C G T A C T G A C G T C G T A T A G C C G T A A C G T A C G T
A C G T C T G A C T G A C A G T C G A T A G T C G T A C G C T A A G C T C A G T T C A G C G A T A G C T T A G C G C T A C G A T G A C T

Sox17/MA0078.1/Jaspar

Match Rank:6
Score:0.51
Offset:4
Orientation:forward strand
Alignment:GATCTACATTGTAVAT
----CTCATTGTC---
 C A T G C G T A A G C T A T G C A C G T G T C A A G T C C T G A C G A T A C G T A C T G A C G T C G T A T A G C C G T A A C G T
A C G T A C G T A C G T A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:7
Score:0.48
Offset:5
Orientation:forward strand
Alignment:GATCTACATTGTAVAT
-----CCTTTGTT---
 C A T G C G T A A G C T A T G C A C G T G T C A A G T C C T G A C G A T A C G T A C T G A C G T C G T A T A G C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:8
Score:0.48
Offset:5
Orientation:forward strand
Alignment:GATCTACATTGTAVAT
-----CCWTTGTY---
 C A T G C G T A A G C T A T G C A C G T G T C A A G T C C T G A C G A T A C G T A C T G A C G T C G T A T A G C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.48
Offset:4
Orientation:forward strand
Alignment:GATCTACATTGTAVAT
----NCCATTGTTC--
 C A T G C G T A A G C T A T G C A C G T G T C A A G T C C T G A C G A T A C G T A C T G A C G T C G T A T A G C C G T A A C G T
A C G T A C G T A C G T A C G T A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:10
Score:0.48
Offset:5
Orientation:forward strand
Alignment:GATCTACATTGTAVAT
-----CCWTTGTYYB-
 C A T G C G T A A G C T A T G C A C G T G T C A A G T C C T G A C G A T A C G T A C T G A C G T C G T A T A G C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T