Information for 11-TMAAKGTCACAKGTYC (Motif 16)

A C G T G T C A C T G A C G T A A C T G A C T G A C G T A G T C C G T A G T A C C G T A A C T G A C T G A C G T G A T C G T A C
Reverse Opposite:
A C T G C T A G G T C A A G T C G T A C A C G T A C T G A C G T A C T G C G T A G T A C G T A C A C G T A G C T A C G T C G T A
p-value:1e-8
log p-value:-2.032e+01
Information Content per bp:1.870
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.6 +/- 16.3bp
Average Position of motif in Background46.1 +/- 16.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:TMAAKGTCACAKGTYC
TCAAGGTCAN------
 A C G T G T C A C T G A C G T A A C T G A C T G A C G T A G T C C G T A G T A C C G T A A C T G A C T G A C G T G A T C G T A C
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T A C G T A C G T A C G T A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:2
Score:0.71
Offset:0
Orientation:forward strand
Alignment:TMAAKGTCACAKGTYC
TCAAGGTCATA-----
 A C G T G T C A C T G A C G T A A C T G A C T G A C G T A G T C C G T A G T A C C G T A A C T G A C T G A C G T G A T C G T A C
G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A A C G T A C G T A C G T A C G T A C G T

NR1H2::RXRA/MA0115.1/Jaspar

Match Rank:3
Score:0.69
Offset:1
Orientation:forward strand
Alignment:TMAAKGTCACAKGTYC--
-AAAGGTCAAAGGTCAAC
 A C G T G T C A C T G A C G T A A C T G A C T G A C G T A G T C C G T A G T A C C G T A A C T G A C T G A C G T G A T C G T A C A C G T A C G T
A C G T G T C A C T G A C T G A A C T G A C T G A C G T A G T C C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A C G T A A T G C

PB0014.1_Esrra_1/Jaspar

Match Rank:4
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---TMAAKGTCACAKGTYC
TATTCAAGGTCATGCGA--
 A C G T A C G T A C G T A C G T G T C A C T G A C G T A A C T G A C T G A C G T A G T C C G T A G T A C C G T A A C T G A C T G A C G T G A T C G T A C
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:5
Score:0.69
Offset:0
Orientation:forward strand
Alignment:TMAAKGTCACAKGTYC
TCAAGGTCAT------
 A C G T G T C A C T G A C G T A A C T G A C T G A C G T A G T C C G T A G T A C C G T A A C T G A C T G A C G T G A T C G T A C
G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T A C G T A C G T A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:6
Score:0.68
Offset:2
Orientation:forward strand
Alignment:TMAAKGTCACAKGTYC
--AAGGTCAC------
 A C G T G T C A C T G A C G T A A C T G A C T G A C G T A G T C C G T A G T A C C G T A A C T G A C T G A C G T G A T C G T A C
A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T A C G T A C G T A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:7
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---TMAAKGTCACAKGTYC
TCTCAAAGGTCACCTG---
 A C G T A C G T A C G T A C G T G T C A C T G A C G T A A C T G A C T G A C G T A G T C C G T A G T A C C G T A A C T G A C T G A C G T G A T C G T A C
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G A C G T A C G T A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:8
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TMAAKGTCACAKGTYC
CAAAGGTCAAGGG---
 A C G T G T C A C T G A C G T A A C T G A C T G A C G T A G T C C G T A G T A C C G T A A C T G A C T G A C G T G A T C G T A C
G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G A C G T A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:9
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---TMAAKGTCACAKGTYC
TCTCAAAGGTCACGAG---
 A C G T A C G T A C G T A C G T G T C A C T G A C G T A A C T G A C T G A C G T A G T C C G T A G T A C C G T A A C T G A C T G A C G T G A T C G T A C
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G A C G T A C G T A C G T

Nr2f6/MA0677.1/Jaspar

Match Rank:10
Score:0.67
Offset:2
Orientation:forward strand
Alignment:TMAAKGTCACAKGTYC
--GAGGTCAAAGGTCA
 A C G T G T C A C T G A C G T A A C T G A C T G A C G T A G T C C G T A G T A C C G T A A C T G A C T G A C G T G A T C G T A C
A C G T A C G T T C A G T C G A C A T G C A T G A C G T A G T C C G T A C T G A T C G A A C T G C A T G A C G T A G T C C T G A