p-value: | 1e-11 |
log p-value: | -2.565e+01 |
Information Content per bp: | 1.698 |
Number of Target Sequences with motif | 10.0 |
Percentage of Target Sequences with motif | 1.41% |
Number of Background Sequences with motif | 24.9 |
Percentage of Background Sequences with motif | 0.05% |
Average Position of motif in Targets | 65.9 +/- 27.6bp |
Average Position of motif in Background | 35.8 +/- 24.9bp |
Strand Bias (log2 ratio + to - strand density) | 1.2 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
NFIC::TLX1/MA0119.1/Jaspar
Match Rank: | 1 |
Score: | 0.68 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | TTTGGCAAGGAGCCAA --TGGCACCATGCCAA |
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NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer
Match Rank: | 2 |
Score: | 0.62 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TTTGGCAAGGAGCCAA- -TTGGCANNNTGCCAAG |
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Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 3 |
Score: | 0.59 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | TTTGGCAAGGAGCCAA -CTGGCAGNCTGCCA- |
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NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer
Match Rank: | 4 |
Score: | 0.58 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | TTTGGCAAGGAGCCAA -TTGCCAAG------- |
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NFIA/MA0670.1/Jaspar
Match Rank: | 5 |
Score: | 0.53 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TTTGGCAAGGAGCCAA NNTTGGCANN------- |
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PB0145.1_Mafb_2/Jaspar
Match Rank: | 6 |
Score: | 0.52 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----TTTGGCAAGGAGCCAA ANATTTTTGCAANTN----- |
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PB0118.1_Esrra_2/Jaspar
Match Rank: | 7 |
Score: | 0.52 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | TTTGGCAAGGAGCCAA---- ---GGCGAGGGGTCAAGGGC |
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PB0155.1_Osr2_2/Jaspar
Match Rank: | 8 |
Score: | 0.52 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TTTGGCAAGGAGCCAA- -NNTGTAGGTAGCANNT |
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PB0154.1_Osr1_2/Jaspar
Match Rank: | 9 |
Score: | 0.51 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TTTGGCAAGGAGCCAA- -NNNTTAGGTAGCNTNT |
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CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer
Match Rank: | 10 |
Score: | 0.51 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --TTTGGCAAGGAGCCAA NATGTTGCAA-------- |
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