Information for 23-RAKGAAGGAAGGM (Motif 36)

T C A G T C G A C A T G T A C G T C G A C T G A C T A G T A C G G T C A C T G A C T A G T C A G T G A C
Reverse Opposite:
A C T G A G T C G A T C G A C T C A G T A T G C G A T C G A C T A G C T A T G C G T A C A G C T A G T C
p-value:1e-6
log p-value:-1.410e+01
Information Content per bp:1.501
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.41%
Number of Background Sequences with motif73.2
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets40.1 +/- 20.3bp
Average Position of motif in Background54.7 +/- 25.7bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:1
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--RAKGAAGGAAGGM---
GGAAGGAAGGAAGGAAGG
 A C G T A C G T T C A G T C G A C A T G T A C G T C G A C T G A C T A G T A C G G T C A C T G A C T A G T C A G T G A C A C G T A C G T A C G T
A C T G C T A G C T G A C T G A C T A G C T A G C T G A C T G A A C T G A T C G T G C A C G T A A C T G A T C G G T C A C T G A C T A G T A C G

E2F6/MA0471.1/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:forward strand
Alignment:RAKGAAGGAAGGM
-GGGCGGGAAGG-
 T C A G T C G A C A T G T A C G T C G A C T G A C T A G T A C G G T C A C T G A C T A G T C A G T G A C
A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:3
Score:0.62
Offset:2
Orientation:forward strand
Alignment:RAKGAAGGAAGGM
--AVCAGGAAGT-
 T C A G T C G A C A T G T A C G T C G A C T G A C T A G T A C G G T C A C T G A C T A G T C A G T G A C
A C G T A C G T C G T A T A G C T A G C T G C A A C T G C T A G C G T A C G T A T C A G G A C T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:4
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:RAKGAAGGAAGGM
------NGAAGC-
 T C A G T C G A C A T G T A C G T C G A C T G A C T A G T A C G G T C A C T G A C T A G T C A G T G A C
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:5
Score:0.61
Offset:2
Orientation:forward strand
Alignment:RAKGAAGGAAGGM
--ANCAGGAAGT-
 T C A G T C G A C A T G T A C G T C G A C T G A C T A G T A C G G T C A C T G A C T A G T C A G T G A C
A C G T A C G T C G T A T G A C T A G C T G C A A C T G A C T G C G T A C G T A T C A G G A C T A C G T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:6
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:RAKGAAGGAAGGM-
--NDCAGGAARTNN
 T C A G T C G A C A T G T A C G T C G A C T G A C T A G T A C G G T C A C T G A C T A G T C A G T G A C A C G T
A C G T A C G T T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.58
Offset:-8
Orientation:forward strand
Alignment:--------RAKGAAGGAAGGM
SMCAGTCWGAKGGAGGAGGC-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T C G A C A T G T A C G T C G A C T G A C T A G T A C G G T C A C T G A C T A G T C A G T G A C
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:RAKGAAGGAAGGM
--GGCGGGAARN-
 T C A G T C G A C A T G T A C G T C G A C T G A C T A G T A C G G T C A C T G A C T A G T C A G T G A C
A C G T A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:9
Score:0.57
Offset:3
Orientation:forward strand
Alignment:RAKGAAGGAAGGM
---ACAGGAAGTG
 T C A G T C G A C A T G T A C G T C G A C T G A C T A G T A C G G T C A C T G A C T A G T C A G T G A C
A C G T A C G T A C G T T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G

PB0028.1_Hbp1_1/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--RAKGAAGGAAGGM-
ACTATGAATGAATGAT
 A C G T A C G T T C A G T C G A C A T G T A C G T C G A C T G A C T A G T A C G G T C A C T G A C T A G T C A G T G A C A C G T
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T