Information for 21-ATATAGCATA (Motif 29)

G T C A A C G T T G C A A C G T C G T A A C T G A G T C C G T A A C G T C G T A
Reverse Opposite:
A C G T C G T A A C G T A C T G A G T C A C G T C G T A A C G T C G T A A C G T
p-value:1e-5
log p-value:-1.319e+01
Information Content per bp:1.922
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif15.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets60.0 +/- 28.0bp
Average Position of motif in Background50.3 +/- 22.7bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU3F3/MA0788.1/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-ATATAGCATA--
AAATTAGCATAAT
 A C G T G T C A A C G T T G C A A C G T C G T A A C T G A G T C C G T A A C G T C G T A A C G T A C G T
G C T A G C T A C G T A G A C T G C A T C G T A T C A G G T A C T G C A G C A T G C T A G C T A G C A T

POU3F2/MA0787.1/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-ATATAGCATA-
TAATTTGCATAA
 A C G T G T C A A C G T T G C A A C G T C G T A A C T G A G T C C G T A A C G T C G T A A C G T
C G A T T G C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A A G C T C G T A G C T A

POU3F4/MA0789.1/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:ATATAGCATA
-ATTTGCATA
 G T C A A C G T T G C A A C G T C G T A A C T G A G T C C G T A A C G T C G T A
A C G T G C T A G C A T C G A T G C A T T C A G G T A C C G T A G A C T C G T A

POU3F1/MA0786.1/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-ATATAGCATA-
TAATTTGCATAA
 A C G T G T C A A C G T T G C A A C G T C G T A A C T G A G T C C G T A A C G T C G T A A C G T
C G A T G T C A G C T A G C A T G C A T G C A T T C A G G T A C C T G A G A C T C G T A G C T A

POU2F1/MA0785.1/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:ATATAGCATA--
AATTTGCATANT
 G T C A A C G T T G C A A C G T C G T A A C T G A G T C C G T A A C G T C G T A A C G T A C G T
G T C A G C T A G C A T G A C T G C A T T C A G G T A C T C G A G C A T C T G A G C A T C G A T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:6
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--ATATAGCATA
BTVATTWGCATA
 A C G T A C G T G T C A A C G T T G C A A C G T C G T A A C T G A G T C C G T A A C G T C G T A
A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A

POU5F1B/MA0792.1/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:ATATAGCATA
-ATTTGCATA
 G T C A A C G T T G C A A C G T C G T A A C T G A G T C C G T A A C G T C G T A
A C G T G C T A G C A T G C A T G C A T T C A G G T A C T C G A G C A T C T G A

DMRT3/MA0610.1/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-ATATAGCATA
AATGTATCAAT
 A C G T G T C A A C G T T G C A A C G T C G T A A C T G A G T C C G T A A C G T C G T A
G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T

POU1F1/MA0784.1/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--ATATAGCATA--
CTAATTTGCATATT
 A C G T A C G T G T C A A C G T T G C A A C G T C G T A A C T G A G T C C G T A A C G T C G T A A C G T A C G T
G A T C G C A T T G C A G C T A C A G T G C A T C G A T T C A G G T A C C T G A G A C T G C T A G C A T G C A T

Pou2f3/MA0627.1/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---ATATAGCATA---
TNTAATTTGCATACNA
 A C G T A C G T A C G T G T C A A C G T T G C A A C G T C G T A A C T G A G T C C G T A A C G T C G T A A C G T A C G T A C G T
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A