Information for 24-CCAGCTTGTGGTA (Motif 28)

T A G C A G T C C G T A C T A G A G T C A C G T A C G T A T C G C G A T A C T G A T C G C G A T C G T A
Reverse Opposite:
G A C T C G T A A T G C A G T C C G T A T A G C G T C A C G T A T C A G A G T C G A C T C T A G A C T G
p-value:1e-5
log p-value:-1.329e+01
Information Content per bp:1.682
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif2.22%
Number of Background Sequences with motif190.0
Percentage of Background Sequences with motif0.42%
Average Position of motif in Targets55.2 +/- 27.1bp
Average Position of motif in Background50.1 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.31
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:CCAGCTTGTGGTA--
---NNHTGTGGTTWN
 T A G C A G T C C G T A C T A G A G T C A C G T A C G T A T C G C G A T A C T G A T C G C G A T C G T A A C G T A C G T
A C G T A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------CCAGCTTGTGGTA-
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A C T A G A G T C A C G T A C G T A T C G C G A T A C T G A T C G C G A T C G T A A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CCAGCTTGTGGTA-
---GTCTGTGGTTT
 T A G C A G T C C G T A C T A G A G T C A C G T A C G T A T C G C G A T A C T G A T C G C G A T C G T A A C G T
A C G T A C G T A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

CTCF/MA0139.1/Jaspar

Match Rank:4
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----CCAGCTTGTGGTA-
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A C T A G A G T C A C G T A C G T A T C G C G A T A C T G A T C G C G A T C G T A A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:CCAGCTTGTGGTA--
-----CTGTGGTTTN
 T A G C A G T C C G T A C T A G A G T C A C G T A C G T A T C G C G A T A C T G A T C G C G A T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:6
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CCAGCTTGTGGTA-
----NNTGTGGTTT
 T A G C A G T C C G T A C T A G A G T C A C G T A C G T A T C G C G A T A C T G A T C G C G A T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.60
Offset:4
Orientation:forward strand
Alignment:CCAGCTTGTGGTA-
----GCTGTGGTTT
 T A G C A G T C C G T A C T A G A G T C A C G T A C G T A T C G C G A T A C T G A T C G C G A T C G T A A C G T
A C G T A C G T A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

RUNX3/MA0684.1/Jaspar

Match Rank:8
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CCAGCTTGTGGTA-
----TTTGCGGTTT
 T A G C A G T C C G T A C T A G A G T C A C G T A C G T A T C G C G A T A C T G A T C G C G A T C G T A A C G T
A C G T A C G T A C G T A C G T C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.59
Offset:-8
Orientation:forward strand
Alignment:--------CCAGCTTGTGGTA
CNNBRGCGCCCCCTGSTGGC-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A C T A G A G T C A C G T A C G T A T C G C G A T A C T G A T C G C G A T C G T A
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:10
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:CCAGCTTGTGGTA-
-----TTGCGGTTT
 T A G C A G T C C G T A C T A G A G T C A C G T A C G T A T C G C G A T A C T G A T C G C G A T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T