Information for 20-GAAAAGTATG (Motif 25)

A C T G C G T A C G T A C G T A C G T A A C T G A C G T C G T A A C G T A C T G
Reverse Opposite:
A G T C C G T A C G A T C G T A A G T C A C G T A C G T A C G T C G A T A G T C
p-value:1e-7
log p-value:-1.678e+01
Information Content per bp:1.948
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.20%
Number of Background Sequences with motif25.0
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets25.7 +/- 25.6bp
Average Position of motif in Background55.8 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HLTF/MA0109.1/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GAAAAGTATG
NNATAAGGNN-
 A C G T A C T G C G T A C G T A C G T A C G T A A C T G A C G T C G T A A C G T A C T G
C G T A A C G T G T C A G C A T C G T A C G T A A C T G A C T G C G A T G C A T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GAAAAGTATG
TGGAAAA-----
 A C G T A C G T A C T G C G T A C G T A C G T A C G T A A C T G A C G T C G T A A C G T A C T G
C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T A C G T

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GAAAAGTATG-----
GAACADWATGTTCTT
 A C T G C G T A C G T A C G T A C G T A A C T G A C G T C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T
C T A G C G T A C G T A A G T C C G T A C A G T C G T A G T C A C G A T A C T G A C G T G C A T A G T C G A C T G C A T

NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:4
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GAAAAGTATG------
NANTGGAAAAANTGAGTCAN
 A C G T A C G T A C G T A C G T A C T G C G T A C G T A C G T A C G T A A C T G A C G T C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
T A C G C T G A T C G A C G A T C T A G C T A G T C G A C T G A T C G A T C G A C G T A T C G A G C A T C A T G C G T A T A C G G C A T T G A C C G T A A G C T

NFAT5/MA0606.1/Jaspar

Match Rank:5
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----GAAAAGTATG
NATGGAAAAN----
 A C G T A C G T A C G T A C G T A C T G C G T A C G T A C G T A C G T A A C T G A C G T C G T A A C G T A C T G
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T

PB0176.1_Sox5_2/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GAAAAGTATG---
NNCTNAATTATGANN
 A C G T A C G T A C T G C G T A C G T A C G T A C G T A A C T G A C G T C G T A A C G T A C T G A C G T A C G T A C G T
G A C T G A T C A T G C A C G T G C A T C T G A C G T A C G A T A C G T G T C A G A C T T C A G G C T A C G A T G C T A

BHLHE23/MA0817.1/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GAAAAGTATG---
-AAACATATGTTT
 A C T G C G T A C G T A C G T A C G T A A C T G A C G T C G T A A C G T A C T G A C G T A C G T A C G T
A C G T C G T A T C G A T G C A G T A C C T G A A G C T T G C A G A C T A C T G A C G T G A C T C G A T

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GAAAAGTATG-----
GRACAGWMTGTYCTB
 A C T G C G T A C G T A C G T A C G T A A C T G A C G T C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T
C T A G C T G A C T G A T A G C C G T A A T C G C G T A T G C A G A C T T C A G G C A T G A C T G A T C G A C T A C T G

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GAAAAGTATG---
--CAGGTAAGTAT
 A C T G C G T A C G T A C G T A C G T A A C T G A C G T C G T A A C G T A C T G A C G T A C G T A C G T
A C G T A C G T T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GAAAAGTATG---
VAGRACAKNCTGTBC
 A C G T A C G T A C T G C G T A C G T A C G T A C G T A A C T G A C G T C G T A A C G T A C T G A C G T A C G T A C G T
T G A C C T G A C T A G T C G A C T G A A T G C C G T A A C T G G C A T G T A C G C A T A T C G G C A T A G C T G A T C