p-value: | 1e-32 |
log p-value: | -7.524e+01 |
Information Content per bp: | 1.620 |
Number of Target Sequences with motif | 41.0 |
Percentage of Target Sequences with motif | 7.01% |
Number of Background Sequences with motif | 221.4 |
Percentage of Background Sequences with motif | 0.49% |
Average Position of motif in Targets | 47.6 +/- 21.3bp |
Average Position of motif in Background | 48.6 +/- 30.0bp |
Strand Bias (log2 ratio + to - strand density) | 0.2 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer
Match Rank: | 1 |
Score: | 0.64 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TGACHTCTGGCTR CTGACCTTTG---- |
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Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer
Match Rank: | 2 |
Score: | 0.62 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGACHTCTGGCTR TGATTTATGGCC- |
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PB0191.1_Tcfap2c_2/Jaspar
Match Rank: | 3 |
Score: | 0.61 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TGACHTCTGGCTR NTGCCCTTGGGCGN |
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NR2F1/MA0017.2/Jaspar
Match Rank: | 4 |
Score: | 0.60 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----TGACHTCTGGCTR CNNTTGACCTTTG---- |
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RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer
Match Rank: | 5 |
Score: | 0.60 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TGACHTCTGGCTR---- BTGACCTCTNNHTGACCY |
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PB0053.1_Rara_1/Jaspar
Match Rank: | 6 |
Score: | 0.60 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----TGACHTCTGGCTR NNNGTGACCTTTGNNN- |
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Hoxc9/MA0485.1/Jaspar
Match Rank: | 7 |
Score: | 0.59 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TGACHTCTGGCTR NTGATTTATGGCC- |
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Nr2e1/MA0676.1/Jaspar
Match Rank: | 8 |
Score: | 0.59 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TGACHTCTGGCTR TTGACTTTT----- |
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COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer
Match Rank: | 9 |
Score: | 0.59 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGACHTCTGGCTR TGACCYCT----- |
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PB0049.1_Nr2f2_1/Jaspar
Match Rank: | 10 |
Score: | 0.58 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----TGACHTCTGGCTR NNNNTGACCTTTNNNN- |
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