Information for 6-GAAACTGCAG (Motif 13)

C A T G T G C A G C T A T G C A A T G C G A C T T A C G T G A C G T C A T C A G
Reverse Opposite:
A G T C C A G T A C T G A T G C C T G A A T C G A C G T C G A T A C G T G T A C
p-value:1e-11
log p-value:-2.621e+01
Information Content per bp:1.679
Number of Target Sequences with motif82.0
Percentage of Target Sequences with motif9.36%
Number of Background Sequences with motif1968.1
Percentage of Background Sequences with motif4.04%
Average Position of motif in Targets45.3 +/- 25.6bp
Average Position of motif in Background49.3 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---GAAACTGCAG----
AATCGCACTGCATTCCG
 A C G T A C G T A C G T C A T G T G C A G C T A T G C A A T G C G A C T T A C G T G A C G T C A T C A G A C G T A C G T A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GAAACTGCAG
NHAACBGYYV
 C A T G T G C A G C T A T G C A A T G C G A C T T A C G T G A C G T C A T C A G
A G T C G C A T C G T A C G T A G T A C A C G T A C T G G A T C G A T C T C G A

PB0034.1_Irf4_1/Jaspar

Match Rank:3
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------GAAACTGCAG
CGTATCGAAACCAAA-
 A C G T A C G T A C G T A C G T A C G T A C G T C A T G T G C A G C T A T G C A A T G C G A C T T A C G T G A C G T C A T C A G
T G A C C T A G C G A T C G T A G A C T A G T C C T A G T C G A C G T A C G T A T A G C G A T C C T G A G T C A C G T A A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GAAACTGCAG--
GAAACTGAAACT
 C A T G T G C A G C T A T G C A A T G C G A C T T A C G T G A C G T C A T C A G A C G T A C G T
T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T

RUNX2/MA0511.2/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GAAACTGCAG
-AAACCGCAA
 C A T G T G C A G C T A T G C A A T G C G A C T T A C G T G A C G T C A T C A G
A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GAAACTGCAG--
GAAAGTGAAAGT
 C A T G T G C A G C T A T G C A A T G C G A C T T A C G T G A C G T C A T C A G A C G T A C G T
T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GAAACTGCAG
SNGCACCTGCHS
 A C G T A C G T C A T G T G C A G C T A T G C A A T G C G A C T T A C G T G A C G T C A T C A G
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.61
Offset:-11
Orientation:reverse strand
Alignment:-----------GAAACTGCAG
TGGCCANNNNNGGAACTGCA-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G T G C A G C T A T G C A A T G C G A C T T A C G T G A C G T C A T C A G
G C A T C T A G C A T G G A T C G A T C C T G A G A T C G C A T A C T G A G C T C A G T C T A G C A T G G C T A C G T A A G T C C G A T C T A G A T G C G C T A A C G T

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GAAACTGCAG--
AGAGRRACAGCWGAC
 A C G T A C G T A C G T C A T G T G C A G C T A T G C A A T G C G A C T T A C G T G A C G T C A T C A G A C G T A C G T
T C G A C T A G C G T A C T A G C T G A T C A G C G T A A G T C C G T A T C A G T G A C G C A T A C T G C G T A A G T C

PB0150.1_Mybl1_2/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GAAACTGCAG--
CGACCAACTGCCGTG
 A C G T A C G T A C G T C A T G T G C A G C T A T G C A A T G C G A C T T A C G T G A C G T C A T C A G A C G T A C G T
A G T C A T C G T G C A G A T C G A T C G C T A G T C A A G T C A G C T A C T G G A T C G T A C C T A G G C A T A C T G