Information for 6-CACTCCGTGACCACGC (Motif 9)

A G T C G C T A A T G C A G C T A T G C G A T C A C T G A C G T A T C G G T C A A T G C T A G C C G T A A G T C A C T G A T G C
Reverse Opposite:
A T C G A G T C T A C G G A C T A C T G T A C G C A G T A T G C C G T A A G T C C T A G A T C G T C G A T A C G C A G T A C T G
p-value:1e-9
log p-value:-2.243e+01
Information Content per bp:1.700
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.10%
Number of Background Sequences with motif20.1
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets58.1 +/- 26.4bp
Average Position of motif in Background40.3 +/- 21.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.22
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax2/MA0067.1/Jaspar

Match Rank:1
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CACTCCGTGACCACGC
----NCGTGACN----
 A G T C G C T A A T G C A G C T A T G C G A T C A C T G A C G T A T C G G T C A A T G C T A G C C G T A A G T C A C T G A T G C
A C G T A C G T A C G T A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T A C G T A C G T A C G T

PB0159.1_Rfx4_2/Jaspar

Match Rank:2
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CACTCCGTGACCACGC--
---NNNGTAACTANGNNA
 A G T C G C T A A T G C A G C T A T G C G A T C A C T G A C G T A T C G G T C A A T G C T A G C C G T A A G T C A C T G A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A T C G A C T G G A C T G T C A C G T A G T A C A G C T G C T A C A T G A T C G T A C G C A G T C G T A

PB0153.1_Nr2f2_2/Jaspar

Match Rank:3
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CACTCCGTGACCACGC---
---NNNNTGACCCGGCGCG
 A G T C G C T A A T G C A G C T A T G C G A T C A C T G A C G T A T C G G T C A A T G C T A G C C G T A A G T C A C T G A T G C A C G T A C G T A C G T
A C G T A C G T A C G T C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

Mitf/MA0620.1/Jaspar

Match Rank:4
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CACTCCGTGACCACGC
--NCACGTGACN----
 A G T C G C T A A T G C A G C T A T G C G A T C A C T G A C G T A T C G G T C A A T G C T A G C C G T A A G T C A C T G A T G C
A C G T A C G T A G T C G T A C C G T A A G T C T C A G C A G T A C T G T G C A A G T C G A T C A C G T A C G T A C G T A C G T

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:5
Score:0.51
Offset:-5
Orientation:reverse strand
Alignment:-----CACTCCGTGACCACGC
NNNTGAACTCNNTGACCTCN-
 A C G T A C G T A C G T A C G T A C G T A G T C G C T A A T G C A G C T A T G C G A T C A C T G A C G T A T C G G T C A A T G C T A G C C G T A A G T C A C T G A T G C
G T A C G A T C G T C A G C A T T C A G G T C A G T C A G T A C A G C T A G T C C G T A T A C G G C A T T A C G T G C A G T A C G A T C G A C T A G T C G A C T A C G T

PB0057.1_Rxra_1/Jaspar

Match Rank:6
Score:0.51
Offset:2
Orientation:forward strand
Alignment:CACTCCGTGACCACGC---
--TGTCGTGACCCCTTAAT
 A G T C G C T A A T G C A G C T A T G C G A T C A C T G A C G T A T C G G T C A A T G C T A G C C G T A A G T C A C T G A T G C A C G T A C G T A C G T
A C G T A C G T C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

PB0207.1_Zic3_2/Jaspar

Match Rank:7
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---CACTCCGTGACCACGC
NNTCCTGCTGTGNNN----
 A C G T A C G T A C G T A G T C G C T A A T G C A G C T A T G C G A T C A C T G A C G T A T C G G T C A A T G C T A G C C G T A A G T C A C T G A T G C
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C A C G T A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:8
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:CACTCCGTGACCACGC
------GTGACCTT--
 A G T C G C T A A T G C A G C T A T G C G A T C A C T G A C G T A T C G G T C A A T G C T A G C C G T A A G T C A C T G A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:9
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CACTCCGTGACCACGC--
-NTNNCGTATCCAAGTNN
 A G T C G C T A A T G C A G C T A T G C G A T C A C T G A C G T A T C G G T C A A T G C T A G C C G T A A G T C A C T G A T G C A C G T A C G T
A C G T C G T A C G A T G C A T A T G C A T G C C T A G G A C T G T C A C G A T A G T C A G T C C T G A G T C A T A C G A G C T T G C A T A C G

PB0157.1_Rara_2/Jaspar

Match Rank:10
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:CACTCCGTGACCACGC---
---NNCNTGACCCCGCTCT
 A G T C G C T A A T G C A G C T A T G C G A T C A C T G A C G T A T C G G T C A A T G C T A G C C G T A A G T C A C T G A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T