Information for 15-TCGCCTGTTGTGG (Motif 16)

A C G T A T G C A C T G A G T C A G T C A C G T C T A G A C G T A C G T A C T G A C G T A C T G A T C G
Reverse Opposite:
A T G C A G T C C G T A A G T C G T C A C G T A G A T C G T C A C T A G A C T G A G T C A T C G G T C A
p-value:1e-7
log p-value:-1.791e+01
Information Content per bp:1.840
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif15.7
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets59.3 +/- 28.6bp
Average Position of motif in Background47.2 +/- 34.2bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0205.1_Zic1_2/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TCGCCTGTTGTGG--
TNTCCTGCTGTGNNG
 A C G T A T G C A C T G A G T C A G T C A C G T C T A G A C G T A C G T A C T G A C G T A C T G A T C G A C G T A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

PB0207.1_Zic3_2/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TCGCCTGTTGTGG--
NNTCCTGCTGTGNNN
 A C G T A T G C A C T G A G T C A G T C A C G T C T A G A C G T A C G T A C T G A C G T A C T G A T C G A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TCGCCTGTTGTGG
CCCCCTGCTGTG-
 A C G T A T G C A C T G A G T C A G T C A C G T C T A G A C G T A C G T A C T G A C G T A C T G A T C G
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TCGCCTGTTGTGG--
TCNCCTGCTGNGNNN
 A C G T A T G C A C T G A G T C A G T C A C G T C T A G A C G T A C G T A C T G A C G T A C T G A T C G A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

PB0183.1_Sry_2/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TCGCCTGTTGTGG-----
-CNNNTATTGTTCNNNNN
 A C G T A T G C A C T G A G T C A G T C A C G T C T A G A C G T A C G T A C T G A C G T A C T G A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:6
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:TCGCCTGTTGTGG----
-----NNHTGTGGTTWN
 A C G T A T G C A C T G A G T C A G T C A C G T C T A G A C G T A C G T A C T G A C G T A C T G A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

PB0168.1_Sox14_2/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TCGCCTGTTGTGG---
-NNNCCATTGTGTNAN
 A C G T A T G C A C T G A G T C A G T C A C G T C T A G A C G T A C G T A C T G A C G T A C T G A T C G A C G T A C G T A C G T
A C G T A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:8
Score:0.57
Offset:4
Orientation:forward strand
Alignment:TCGCCTGTTGTGG-
----CCATTGTTNY
 A C G T A T G C A C T G A G T C A G T C A C G T C T A G A C G T A C G T A C T G A C G T A C T G A T C G A C G T
A C G T A C G T A C G T A C G T A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TCGCCTGTTGTGG
GGCCYCCTGCTGDGH
 A C G T A C G T A C G T A T G C A C T G A G T C A G T C A C G T C T A G A C G T A C G T A C T G A C G T A C T G A T C G
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

RUNX1/MA0002.2/Jaspar

Match Rank:10
Score:0.55
Offset:5
Orientation:forward strand
Alignment:TCGCCTGTTGTGG---
-----GTCTGTGGTTT
 A C G T A T G C A C T G A G T C A G T C A C G T C T A G A C G T A C G T A C T G A C G T A C T G A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T