Information for 5-TTWCTTTTMATGGGTC (Motif 7)

A C G T A C G T C G T A A G T C A C G T A C G T A C G T A C G T G T A C G T C A C G A T A C T G C T A G A C T G G C A T A G T C
Reverse Opposite:
T A C G C G T A A G T C A G T C T G A C C G T A A C G T C A T G T C G A C G T A C G T A C G T A A C T G G C A T G T C A G T C A
p-value:1e-13
log p-value:-3.005e+01
Information Content per bp:1.726
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.20%
Number of Background Sequences with motif6.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.6 +/- 21.0bp
Average Position of motif in Background56.6 +/- 11.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXB13/MA0901.1/Jaspar

Match Rank:1
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:TTWCTTTTMATGGGTC
----NTTTTATTGG--
 A C G T A C G T C G T A A G T C A C G T A C G T A C G T A C G T G T A C G T C A C G A T A C T G C T A G A C T G G C A T A G T C
A C G T A C G T A C G T A C G T C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G A C G T A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:2
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:TTWCTTTTMATGGGTC
----NTTTTATTGG--
 A C G T A C G T C G T A A G T C A C G T A C G T A C G T A C G T G T A C G T C A C G A T A C T G C T A G A C T G G C A T A G T C
A C G T A C G T A C G T A C G T C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G A C G T A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:3
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:TTWCTTTTMATGGGTC
----TTTTTATTGG--
 A C G T A C G T C G T A A G T C A C G T A C G T A C G T A C G T G T A C G T C A C G A T A C T G C T A G A C T G G C A T A G T C
A C G T A C G T A C G T A C G T C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G A C G T A C G T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:4
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:TTWCTTTTMATGGGTC
-----TTTTATTRGN-
 A C G T A C G T C G T A A G T C A C G T A C G T A C G T A C G T G T A C G T C A C G A T A C T G C T A G A C T G G C A T A G T C
A C G T A C G T A C G T A C G T A C G T C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A A C G T

PH0057.1_Hoxb13/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TTWCTTTTMATGGGTC-
-NNAATTTTATTGGNTN
 A C G T A C G T C G T A A G T C A C G T A C G T A C G T A C G T G T A C G T C A C G A T A C T G C T A G A C T G G C A T A G T C A C G T
A C G T A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:6
Score:0.62
Offset:5
Orientation:forward strand
Alignment:TTWCTTTTMATGGGTC
-----TTTTATKRGG-
 A C G T A C G T C G T A A G T C A C G T A C G T A C G T A C G T G T A C G T C A C G A T A C T G C T A G A C T G G C A T A G T C
A C G T A C G T A C G T A C G T A C G T C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TTWCTTTTMATGGGTC
TTGACTTTT--------
 A C G T A C G T A C G T C G T A A G T C A C G T A C G T A C G T A C G T G T A C G T C A C G A T A C T G C T A G A C T G G C A T A G T C
C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:8
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:TTWCTTTTMATGGGTC
-----TTTAATTGCN-
 A C G T A C G T C G T A A G T C A C G T A C G T A C G T A C G T G T A C G T C A C G A T A C T G C T A G A C T G G C A T A G T C
A C G T A C G T A C G T A C G T A C G T C G A T A G C T C G A T G C T A C G T A G A C T C A G T C T A G T A G C A T G C A C G T

PH0064.1_Hoxb9/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TTWCTTTTMATGGGTC-
-NGANTTTTATGGCTCN
 A C G T A C G T C G T A A G T C A C G T A C G T A C G T A C G T G T A C G T C A C G A T A C T G C T A G A C T G G C A T A G T C A C G T
A C G T G A T C C A T G C T G A C G T A G C A T C G A T C G A T C G A T C G T A A G C T C A T G C T A G T A G C A G C T A G T C A G C T

Hoxd9/MA0913.1/Jaspar

Match Rank:10
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:TTWCTTTTMATGGGTC
----TTTTTATTGC--
 A C G T A C G T C G T A A G T C A C G T A C G T A C G T A C G T G T A C G T C A C G A T A C T G C T A G A C T G G C A T A G T C
A C G T A C G T A C G T A C G T C G A T G C A T C A G T C G A T C G A T C G T A G A C T A C G T C T A G A G T C A C G T A C G T