Information for 12-GTGCGGCACG (Motif 25)

A C T G A C G T C T A G G T A C T C A G A C T G A G T C G T C A A G T C A C T G
Reverse Opposite:
A G T C C T A G A C G T A C T G A G T C A G T C A C T G A G T C C G T A A G T C
p-value:1e-8
log p-value:-1.878e+01
Information Content per bp:1.867
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif9.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets60.7 +/- 25.1bp
Average Position of motif in Background44.6 +/- 48.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:1
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:GTGCGGCACG---
-----GCACGTAY
 A C T G A C G T C T A G G T A C T C A G A C T G A G T C G T C A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:2
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:GTGCGGCACG---
-----GCACGTNC
 A C T G A C G T C T A G G T A C T C A G A C T G A G T C G T C A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:3
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:GTGCGGCACG--
----BGCACGTA
 A C T G A C G T C T A G G T A C T C A G A C T G A G T C G T C A A G T C A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A

Hes1/MA1099.1/Jaspar

Match Rank:4
Score:0.63
Offset:4
Orientation:forward strand
Alignment:GTGCGGCACG----
----GGCACGCGTC
 A C T G A C G T C T A G G T A C T C A G A C T G A G T C G T C A A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G T A C G G A T C C T G A A G T C T C A G G A T C A C T G G A C T G T A C

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:5
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GTGCGGCACG---
---TBGCACGCAA
 A C T G A C G T C T A G G T A C T C A G A C T G A G T C G T C A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:6
Score:0.60
Offset:5
Orientation:forward strand
Alignment:GTGCGGCACG-----
-----GCACGTACCC
 A C T G A C G T C T A G G T A C T C A G A C T G A G T C G T C A A G T C A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C

HES7/MA0822.1/Jaspar

Match Rank:7
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GTGCGGCACG-----
---TGGCACGTGCCA
 A C T G A C G T C T A G G T A C T C A G A C T G A G T C G T C A A G T C A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T T A C G C T A G A G T C C G T A A G T C A C T G A G C T C T A G A G T C A G T C C T G A

HES5/MA0821.1/Jaspar

Match Rank:8
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GTGCGGCACG-----
---TGGCACGTGCCG
 A C T G A C G T C T A G G T A C T C A G A C T G A G T C G T C A A G T C A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T T C A G T C A G A G T C C T G A A G T C C A T G A G C T A C T G A G T C A G T C C T A G

HEY1/MA0823.1/Jaspar

Match Rank:9
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:GTGCGGCACG----
----GGCACGTGTC
 A C T G A C G T C T A G G T A C T C A G A C T G A G T C G T C A A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G T C A G G A T C T C G A A T G C A C T G A G C T T C A G A G C T A T G C

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:10
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:GTGCGGCACG--
------CACGCA
 A C T G A C G T C T A G G T A C T C A G A C T G A G T C G T C A A G T C A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A