Information for 2-GCCCTCTGGTGGYCAG (Motif 2)

A C T G G T A C A G T C G T A C A G C T A G T C A C G T A C T G A T C G C A G T C T A G A T C G A G T C A G T C C T G A C A T G
Reverse Opposite:
G A T C A G C T A C T G T C A G A T G C A G T C G C T A A T G C G T A C C G T A A C T G C T G A A C T G A C T G A C T G A G T C
p-value:1e-22
log p-value:-5.074e+01
Information Content per bp:1.785
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.36%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets36.8 +/- 21.2bp
Average Position of motif in Background77.4 +/- 7.7bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF/MA0139.1/Jaspar

Match Rank:1
Score:0.83
Offset:-4
Orientation:reverse strand
Alignment:----GCCCTCTGGTGGYCAG
TAGCGCCCCCTGGTGGCCA-
 A C G T A C G T A C G T A C G T A C T G G T A C A G T C G T A C A G C T A G T C A C G T A C T G A T C G C A G T C T A G A T C G A G T C A G T C C T G A C A T G
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.82
Offset:-5
Orientation:forward strand
Alignment:-----GCCCTCTGGTGGYCAG
ANAGTGCCACCTGGTGGCCA-
 A C G T A C G T A C G T A C G T A C G T A C T G G T A C A G T C G T A C A G C T A G T C A C G T A C T G A T C G C A G T C T A G A T C G A G T C A G T C C T G A C A T G
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.79
Offset:-7
Orientation:forward strand
Alignment:-------GCCCTCTGGTGGYCAG
CNNBRGCGCCCCCTGSTGGC---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G G T A C A G T C G T A C A G C T A G T C A C G T A C T G A T C G C A G T C T A G A T C G A G T C A G T C C T G A C A T G
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C A C G T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GCCCTCTGGTGGYCAG
GCCATCTGTT------
 A C T G G T A C A G T C G T A C A G C T A G T C A C G T A C T G A T C G C A G T C T A G A T C G A G T C A G T C C T G A C A T G
T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GCCCTCTGGTGGYCAG
NTGCCCANNGGTNA----
 A C G T A C G T A C T G G T A C A G T C G T A C A G C T A G T C A C G T A C T G A T C G C A G T C T A G A T C G A G T C A G T C C T G A C A T G
T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A A C G T A C G T A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCCCTCTGGTGGYCAG
ACCATCTGTT------
 A C T G G T A C A G T C G T A C A G C T A G T C A C G T A C T G A T C G C A G T C T A G A T C G A G T C A G T C C T G A C A T G
T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GCCCTCTGGTGGYCAG
CCNNACCATCTGGCCTN---
 A C G T A C G T A C G T A C G T A C T G G T A C A G T C G T A C A G C T A G T C A C G T A C T G A T C G C A G T C T A G A T C G A G T C A G T C C T G A C A T G
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T A C G T A C G T A C G T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GCCCTCTGGTGGYCAG
RCCATMTGTT------
 A C T G G T A C A G T C G T A C A G C T A G T C A C G T A C T G A T C G C A G T C T A G A T C G A G T C A G T C C T G A C A T G
C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T A C G T A C G T A C G T A C G T A C G T A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GCCCTCTGGTGGYCAG
GCCAGCTGBTNB----
 A C T G G T A C A G T C G T A C A G C T A G T C A C G T A C T G A T C G C A G T C T A G A T C G A G T C A G T C C T G A C A T G
T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C A C G T A C G T A C G T A C G T

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GCCCTCTGGTGGYCAG
NTGCCCTTGGGCGN----
 A C G T A C G T A C T G G T A C A G T C G T A C A G C T A G T C A C G T A C T G A T C G C A G T C T A G A T C G A G T C A G T C C T G A C A T G
G A T C G C A T T C A G G T A C G A T C G A T C C G A T G A C T C T A G C T A G C A T G A G T C C T A G T A C G A C G T A C G T A C G T A C G T