Information for 3-BCGCRGCTCCSGAGCC (Motif 6)

A C G T A T G C A C T G A G T C T C G A A T C G A G T C A C G T A G T C A T G C A T C G A T C G C T G A A C T G A G T C A T G C
Reverse Opposite:
A T C G A C T G A G T C G A C T A T G C T A G C A T C G T C A G G T C A A C T G T A G C A G C T A C T G A G T C A T C G T G C A
p-value:1e-13
log p-value:-3.054e+01
Information Content per bp:1.793
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.7 +/- 22.8bp
Average Position of motif in Background66.4 +/- 19.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.62
Offset:5
Orientation:forward strand
Alignment:BCGCRGCTCCSGAGCC
-----GCTCCG-----
 A C G T A T G C A C T G A G T C T C G A A T C G A G T C A C G T A G T C A T G C A T C G A T C G C T G A A C T G A G T C A T G C
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:BCGCRGCTCCSGAGCC
-CGCAGCTGCG-----
 A C G T A T G C A C T G A G T C T C G A A T C G A G T C A C G T A G T C A T G C A T C G A T C G C T G A A C T G A G T C A T G C
A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T A C G T A C G T A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:3
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---BCGCRGCTCCSGAGCC
NNNNAGCAGCTGCTGAN--
 A C G T A C G T A C G T A C G T A T G C A C T G A G T C T C G A A T C G A G T C A C G T A G T C A T G C A T C G A T C G C T G A A C T G A G T C A T G C
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G A C G T A C G T

POL011.1_XCPE1/Jaspar

Match Rank:4
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:BCGCRGCTCCSGAGCC
-----GGTCCCGCCC-
 A C G T A T G C A C T G A G T C T C G A A T C G A G T C A C G T A G T C A T G C A T C G A T C G C T G A A C T G A G T C A T G C
A C G T A C G T A C G T A C G T A C G T A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C A C G T

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-BCGCRGCTCCSGAGCC---
GAGCCTGGTACTGWGCCTGR
 A C G T A C G T A T G C A C T G A G T C T C G A A T C G A G T C A C G T A G T C A T G C A T C G A T C G C T G A A C T G A G T C A T G C A C G T A C G T A C G T
T A C G C T G A C A T G G A T C G T A C G C A T T C A G T A C G A G C T G T C A G A T C G C A T T A C G C G T A C T A G G A T C G A T C C G A T A C T G T C A G

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:BCGCRGCTCCSGAGCC
----GGCTCYAKCAYC
 A C G T A T G C A C T G A G T C T C G A A T C G A G T C A C G T A G T C A T G C A T C G A T C G C T G A A C T G A G T C A T G C
A C G T A C G T A C G T A C G T C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.51
Offset:2
Orientation:forward strand
Alignment:BCGCRGCTCCSGAGCC
--NCAGCTGCTG----
 A C G T A T G C A C T G A G T C T C G A A T C G A G T C A C G T A G T C A T G C A T C G A T C G C T G A A C T G A G T C A T G C
A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:8
Score:0.50
Offset:1
Orientation:forward strand
Alignment:BCGCRGCTCCSGAGCC
-GACAGCTGCAG----
 A C G T A T G C A C T G A G T C T C G A A T C G A G T C A C G T A G T C A T G C A T C G A T C G C T G A A C T G A G T C A T G C
A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:BCGCRGCTCCSGAGCC
----NGCTN-------
 A C G T A T G C A C T G A G T C T C G A A T C G A G T C A C G T A G T C A T G C A T C G A T C G C T G A A C T G A G T C A T G C
A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:10
Score:0.50
Offset:8
Orientation:forward strand
Alignment:BCGCRGCTCCSGAGCC
--------AGCGCGCC
 A C G T A T G C A C T G A G T C T C G A A T C G A G T C A C G T A G T C A T G C A T C G A T C G C T G A A C T G A G T C A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C