Information for 4-GGCTCCCTCT (Motif 4)

C T A G T C A G G A T C A C G T A G T C G A T C T A G C C A G T A G T C A G C T
Reverse Opposite:
T C G A T C A G G T C A A T C G C T A G T C A G T G C A C T A G A G T C G A T C
p-value:1e-14
log p-value:-3.248e+01
Information Content per bp:1.648
Number of Target Sequences with motif140.0
Percentage of Target Sequences with motif15.77%
Number of Background Sequences with motif3795.2
Percentage of Background Sequences with motif7.92%
Average Position of motif in Targets50.1 +/- 24.3bp
Average Position of motif in Background49.9 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.70
Offset:1
Orientation:forward strand
Alignment:GGCTCCCTCT
-GCTCCG---
 C T A G T C A G G A T C A C G T A G T C G A T C T A G C C A G T A G T C A G C T
A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GGCTCCCTCT-
NCTTCCCGCCC
 C T A G T C A G G A T C A C G T A G T C G A T C T A G C C A G T A G T C A G C T A C G T
A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C

PB0052.1_Plagl1_1/Jaspar

Match Rank:3
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----GGCTCCCTCT-
NNNGGGGCGCCCCCNN
 A C G T A C G T A C G T A C G T A C G T C T A G T C A G G A T C A C G T A G T C G A T C T A G C C A G T A G T C A G C T A C G T
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GGCTCCCTCT
NYTTCCCGCC
 C T A G T C A G G A T C A C G T A G T C G A T C T A G C C A G T A G T C A G C T
T A G C A G C T G A C T A G C T A T G C T G A C T A G C C A T G A T G C A T G C

POL006.1_BREu/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GGCTCCCTCT
GGCGCGCT--
 C T A G T C A G G A T C A C G T A G T C G A T C T A G C C A G T A G T C A G C T
C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GGCTCCCTCT------
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T C T A G T C A G G A T C A C G T A G T C G A T C T A G C C A G T A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GGCTCCCTCT--
GGCTCYAKCAYC
 C T A G T C A G G A T C A C G T A G T C G A T C T A G C C A G T A G T C A G C T A C G T A C G T
C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C

POL011.1_XCPE1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GGCTCCCTCT-
-GGTCCCGCCC
 C T A G T C A G G A T C A C G T A G T C G A T C T A G C C A G T A G T C A G C T A C G T
A C G T A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C

SPIB/MA0081.1/Jaspar

Match Rank:9
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GGCTCCCTCT
---TTCCTCT
 C T A G T C A G G A T C A C G T A G T C G A T C T A G C C A G T A G T C A G C T
A C G T A C G T A C G T C G A T C G A T G A T C A G T C A C G T A T G C C G A T

CTCF/MA0139.1/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GGCTCCCTCT--------
TAGCGCCCCCTGGTGGCCA
 A C G T C T A G T C A G G A T C A C G T A G T C G A T C T A G C C A G T A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A