Information for 8-TCGGGAGCGA (Motif 13)

A G C T A G T C A T C G C T A G C A T G G T C A A C T G A T G C A C T G C G T A
Reverse Opposite:
G C A T A G T C A T C G A G T C A C G T G T A C A G T C A T G C C T A G T C G A
p-value:1e-9
log p-value:-2.303e+01
Information Content per bp:1.836
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.58%
Number of Background Sequences with motif69.9
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets37.6 +/- 24.0bp
Average Position of motif in Background55.4 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:TCGGGAGCGA
--CGGAGC--
 A G C T A G T C A T C G C T A G C A T G G T C A A C T G A T G C A C T G C G T A
A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T

Gabpa/MA0062.2/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TCGGGAGCGA-
CCGGAAGTGGC
 A G C T A G T C A T C G C T A G C A T G G T C A A C T G A T G C A C T G C G T A A C G T
T A G C T G A C A C T G A C T G T C G A G C T A T C A G G A C T T C A G T C A G T G A C

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.59
Offset:4
Orientation:forward strand
Alignment:TCGGGAGCGA
----CAGCC-
 A G C T A G T C A T C G C T A G C A T G G T C A A C T G A T G C A C T G C G T A
A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:4
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TCGGGAGCGA-
NNNACCGAGAGTNNN
 A C G T A C G T A C G T A C G T A G C T A G T C A T C G C T A G C A T G G T C A A C T G A T G C A C T G C G T A A C G T
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

POL011.1_XCPE1/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TCGGGAGCGA
GGGCGGGACC--
 A C G T A C G T A G C T A G T C A T C G C T A G C A T G G T C A A C T G A T G C A C T G C G T A
A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T A C G T

ELK4/MA0076.2/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TCGGGAGCGA
NCCGGAAGTGG
 A C G T A G C T A G T C A T C G C T A G C A T G G T C A A C T G A T G C A C T G C G T A
T C A G T A G C G T A C A C T G A C T G C G T A C G T A T C A G G A C T T A C G T A C G

PB0010.1_Egr1_1/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TCGGGAGCGA-
ANTGCGGGGGCGGN
 A C G T A C G T A C G T A G C T A G T C A T C G C T A G C A T G G T C A A C T G A T G C A C T G C G T A A C G T
G T C A C T G A G C A T T C A G T G A C C A T G A C T G C T A G A T C G A C T G A G T C C T A G C A T G C T G A

E2F6/MA0471.1/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TCGGGAGCGA---
--GGGCGGGAAGG
 A G C T A G T C A T C G C T A G C A T G G T C A A C T G A T G C A C T G C G T A A C G T A C G T A C G T
A C G T A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G

ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------TCGGGAGCGA---------
RGGCAMTAGGGAGCCATRGAAGGTK
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C A T C G C T A G C A T G G T C A A C T G A T G C A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C T A G C T A G A G T C T C G A T G C A G A C T C T G A A C T G A C T G A C T G C G T A A C T G A G T C G A T C C G T A A G C T C T A G A T C G G T C A C T G A C T A G T C A G A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TCGGGAGCGA
--NGAAGC--
 A G C T A G T C A T C G C T A G C A T G G T C A A C T G A T G C A C T G C G T A
A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T