Information for 6-CAGGCAACTCTGG (Motif 8)

A G T C C G T A A C T G A C T G G T A C G T C A C G T A A G T C A C G T A G T C A C G T A C T G A C T G
Reverse Opposite:
G T A C A G T C C G T A A C T G C G T A A C T G A C G T A C G T A C T G A G T C A G T C A C G T C T A G
p-value:1e-10
log p-value:-2.498e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.2 +/- 25.9bp
Average Position of motif in Background50.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CAGGCAACTCTGG
AAGGCAAGTGT--
 A G T C C G T A A C T G A C T G G T A C G T C A C G T A A G T C A C G T A G T C A C G T A C T G A C T G
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:2
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CAGGCAACTCTGG
NACAGGAAAT-----
 A C G T A C G T A G T C C G T A A C T G A C T G G T A C G T C A C G T A A G T C A C G T A G T C A C G T A C T G A C T G
T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CAGGCAACTCTGG
NACAGGAAAT-----
 A C G T A C G T A G T C C G T A A C T G A C T G G T A C G T C A C G T A A G T C A C G T A G T C A C G T A C T G A C T G
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:4
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-CAGGCAACTCTGG-
SCAGYCADGCATGAC
 A C G T A G T C C G T A A C T G A C T G G T A C G T C A C G T A A G T C A C G T A G T C A C G T A C T G A C T G A C G T
A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

PB0139.1_Irf5_2/Jaspar

Match Rank:5
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:CAGGCAACTCTGG-----
---NNAATTCTCGNTNAN
 A G T C C G T A A C T G A C T G G T A C G T C A C G T A A G T C A C G T A G T C A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:6
Score:0.51
Offset:6
Orientation:forward strand
Alignment:CAGGCAACTCTGG---
------GGTCTGGCAT
 A G T C C G T A A C T G A C T G G T A C G T C A C G T A A G T C A C G T A G T C A C G T A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:7
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---CAGGCAACTCTGG
TBGCACGCAA------
 A C G T A C G T A C G T A G T C C G T A A C T G A C T G G T A C G T C A C G T A A G T C A C G T A G T C A C G T A C T G A C T G
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T A C G T A C G T A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:8
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CAGGCAACTCTGG
--GGAAATTCCC-
 A G T C C G T A A C T G A C T G G T A C G T C A C G T A A G T C A C G T A G T C A C G T A C T G A C T G
A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T

ESR2/MA0258.2/Jaspar

Match Rank:9
Score:0.50
Offset:1
Orientation:forward strand
Alignment:CAGGCAACTCTGG---
-AGGTCACCCTGACCT
 A G T C C G T A A C T G A C T G G T A C G T C A C G T A A G T C A C G T A G T C A C G T A C T G A C T G A C G T A C G T A C G T
A C G T C T G A C A T G C T A G A C G T A T G C C G T A A T G C T G A C T A G C G C A T T C A G G T C A G A T C G A T C G A C T

ZBTB18/MA0698.1/Jaspar

Match Rank:10
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:CAGGCAACTCTGG---
---NAACATCTGGATN
 A G T C C G T A A C T G A C T G G T A C G T C A C G T A A G T C A C G T A G T C A C G T A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T T C A G G T C A C T G A A G T C T G C A C A G T T A G C G C A T C A T G A C T G T G C A G C A T C A T G