Information for 3-CSGGCKCCCGGGGGCC (Motif 6)

A T G C T A C G T C A G A C T G A T G C A C T G T A G C T A G C G A T C C T A G C A T G C T A G T C A G C A T G A T G C A T G C
Reverse Opposite:
T A C G A T C G G A T C A G T C G A T C G T A C A G T C C T A G A C T G A T C G T G A C A T C G A G T C A G T C A T G C A T C G
p-value:1e-11
log p-value:-2.565e+01
Information Content per bp:1.660
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif2.84%
Number of Background Sequences with motif225.4
Percentage of Background Sequences with motif0.47%
Average Position of motif in Targets44.0 +/- 26.2bp
Average Position of motif in Background49.1 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0101.1_Zic1_1/Jaspar

Match Rank:1
Score:0.69
Offset:2
Orientation:forward strand
Alignment:CSGGCKCCCGGGGGCC
--CACCCCCGGGGGGG
 A T G C T A C G T C A G A C T G A T G C A C T G T A G C T A G C G A T C C T A G C A T G C T A G T C A G C A T G A T G C A T G C
A C G T A C G T A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G

PB0102.1_Zic2_1/Jaspar

Match Rank:2
Score:0.68
Offset:2
Orientation:forward strand
Alignment:CSGGCKCCCGGGGGCC-
--CCCCCCCGGGGGGGT
 A T G C T A C G T C A G A C T G A T G C A C T G T A G C T A G C G A T C C T A G C A T G C T A G T C A G C A T G A T G C A T G C A C G T
A C G T A C G T A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G A T C G A C T G C A T G C A T G C A T G A T C G A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:3
Score:0.67
Offset:2
Orientation:forward strand
Alignment:CSGGCKCCCGGGGGCC-
--CCCCCCCGGGGGGGT
 A T G C T A C G T C A G A C T G A T G C A C T G T A G C T A G C G A T C C T A G C A T G C T A G T C A G C A T G A T G C A T G C A C G T
A C G T A C G T A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G T A C G A C T G C A T G C A T G C A T G A T C G A G C T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.66
Offset:3
Orientation:forward strand
Alignment:CSGGCKCCCGGGGGCC
---GTCCCCAGGGGA-
 A T G C T A C G T C A G A C T G A T G C A C T G T A G C T A G C G A T C C T A G C A T G C T A G T C A G C A T G A T G C A T G C
A C G T A C G T A C G T C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:5
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:CSGGCKCCCGGGGGCC
----TGCCCNGGGGCA
 A T G C T A C G T C A G A C T G A T G C A C T G T A G C T A G C G A T C C T A G C A T G C T A G T C A G C A T G A T G C A T G C
A C G T A C G T A C G T A C G T G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A

PLAG1/MA0163.1/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CSGGCKCCCGGGGGCC
GGGGCCCAAGGGGG--
 A T G C T A C G T C A G A C T G A T G C A C T G T A G C T A G C G A T C C T A G C A T G C T A G T C A G C A T G A T G C A T G C
A C T G C T A G A C T G A C T G A T G C A G T C G T A C C G T A T G C A C A T G A C T G A C T G A C T G C T A G A C G T A C G T

Znf423/MA0116.1/Jaspar

Match Rank:7
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CSGGCKCCCGGGGGCC-
--GGCACCCAGGGGTGC
 A T G C T A C G T C A G A C T G A T G C A C T G T A G C T A G C G A T C C T A G C A T G C T A G T C A G C A T G A T G C A T G C A C G T
A C G T A C G T T C A G A T C G G T A C G T C A A G T C A G T C G A T C C G T A C T A G A C T G A C T G A C T G A C G T A C T G G T A C

TFAP2B/MA0811.1/Jaspar

Match Rank:8
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:CSGGCKCCCGGGGGCC
----TGCCCTNGGGCA
 A T G C T A C G T C A G A C T G A T G C A C T G T A G C T A G C G A T C C T A G C A T G C T A G T C A G C A T G A T G C A T G C
A C G T A C G T A C G T A C G T G A C T T A C G A T G C A G T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A

TFAP2C/MA0524.2/Jaspar

Match Rank:9
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:CSGGCKCCCGGGGGCC
----TGCCCTNGGGCA
 A T G C T A C G T C A G A C T G A T G C A C T G T A G C T A G C G A T C C T A G C A T G C T A G T C A G C A T G A T G C A T G C
A C G T A C G T A C G T A C G T G A C T T A C G A T G C G A T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A

PB0052.1_Plagl1_1/Jaspar

Match Rank:10
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CSGGCKCCCGGGGGCC
TTGGGGGCGCCCCTAG---
 A C G T A C G T A C G T A T G C T A C G T C A G A C T G A T G C A C T G T A G C T A G C G A T C C T A G C A T G C T A G T C A G C A T G A T G C A T G C
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G A C G T A C G T A C G T