Information for 15-AGCACKGAGMACA (Motif 19)

C G T A C T A G A G T C C G T A A G T C A C T G A T C G C G T A A C T G G T C A C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A C G T A G T C A C G T A T G C G T A C C T A G A C G T A C T G A G T C A C G T
p-value:1e-7
log p-value:-1.699e+01
Information Content per bp:1.912
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif6.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.5 +/- 15.1bp
Average Position of motif in Background71.2 +/- 13.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0099.1_Zfp691_1/Jaspar

Match Rank:1
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------AGCACKGAGMACA
NNNNTGAGCACTGTNNG--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T A G A G T C C G T A A G T C A C T G A T C G C G T A A C T G G T C A C G T A A G T C C G T A
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G A C G T A C G T

REST/MA0138.2/Jaspar

Match Rank:2
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---AGCACKGAGMACA-----
TTCAGCACCATGGACAGCGCC
 A C G T A C G T A C G T C G T A C T A G A G T C C G T A A G T C A C T G A T C G C G T A A C T G G T C A C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:3
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AGCACKGAGMACA-----
TCAGCACCATGGACAGCTCC
 A C G T A C G T C G T A C T A G A G T C C G T A A G T C A C T G A T C G C G T A A C T G G T C A C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:4
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AGCACKGAGMACA
AAGCACTTAA----
 A C G T C G T A C T A G A G T C C G T A A G T C A C T G A T C G C G T A A C T G G T C A C G T A A G T C C G T A
T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.56
Offset:4
Orientation:forward strand
Alignment:AGCACKGAGMACA-
----CCAGGAACAG
 C G T A C T A G A G T C C G T A A G T C A C T G A T C G C G T A A C T G G T C A C G T A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

POL013.1_MED-1/Jaspar

Match Rank:6
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:AGCACKGAGMACA
----CGGAGC---
 C G T A C T A G A G T C C G T A A G T C A C T G A T C G C G T A A C T G G T C A C G T A A G T C C G T A
A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:AGCACKGAGMACA-
----GGGAGGACNG
 C G T A C T A G A G T C C G T A A G T C A C T G A T C G C G T A A C T G G T C A C G T A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----AGCACKGAGMACA---
AADGAGVCANYASTACAGNC
 A C G T A C G T A C G T A C G T C G T A C T A G A G T C C G T A A G T C A C T G A T C G C G T A A C T G G T C A C G T A A G T C C G T A A C G T A C G T A C G T
G C T A T C G A C G A T C T A G C T G A C A T G T A G C G T A C C T G A C A T G G A T C G C T A T A G C G A C T C T G A A T G C T G C A C T A G C T G A G A T C

PB0208.1_Zscan4_2/Jaspar

Match Rank:9
Score:0.49
Offset:4
Orientation:forward strand
Alignment:AGCACKGAGMACA-------
----CGAAGCACACAAAATA
 C G T A C T A G A G T C C G T A A G T C A C T G A T C G C G T A A C T G G T C A C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:10
Score:0.49
Offset:1
Orientation:forward strand
Alignment:AGCACKGAGMACA
-GCACGTACCC--
 C G T A C T A G A G T C C G T A A G T C A C T G A T C G C G T A A C T G G T C A C G T A A G T C C G T A
A C G T C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C A C G T A C G T