Information for 4-AGGCTCCAGCVCGCCT (Motif 12)

G T C A A C T G A C T G G T A C A C G T A T G C A G T C C G T A A C T G A G T C T C G A T A G C A C T G A G T C A G T C C G A T
Reverse Opposite:
C G T A A C T G A C T G A G T C A T C G A C G T A C T G G T A C A C G T A C T G T A C G G T C A C A T G A G T C A G T C C A G T
p-value:1e-9
log p-value:-2.153e+01
Information Content per bp:1.839
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets63.0 +/- 19.7bp
Average Position of motif in Background38.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL006.1_BREu/Jaspar

Match Rank:1
Score:0.65
Offset:7
Orientation:forward strand
Alignment:AGGCTCCAGCVCGCCT
-------AGCGCGCC-
 G T C A A C T G A C T G G T A C A C G T A T G C A G T C C G T A A C T G A G T C T C G A T A G C A C T G A G T C A G T C C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AGGCTCCAGCVCGCCT
-GGCTCYAKCAYC---
 G T C A A C T G A C T G G T A C A C G T A T G C A G T C C G T A A C T G A G T C T C G A T A G C A C T G A G T C A G T C C G A T
A C G T C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.52
Offset:6
Orientation:forward strand
Alignment:AGGCTCCAGCVCGCCT
------CAGCC-----
 G T C A A C T G A C T G G T A C A C G T A T G C A G T C C G T A A C T G A G T C T C G A T A G C A C T G A G T C A G T C C G A T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T

PB0008.1_E2F2_1/Jaspar

Match Rank:4
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:AGGCTCCAGCVCGCCT----
-----NTCGCGCGCCTTNNN
 G T C A A C T G A C T G G T A C A C G T A T G C A G T C C G T A A C T G A G T C T C G A T A G C A C T G A G T C A G T C C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C G A T A T G C C T A G T A G C A T C G A T G C A C T G A T G C A T G C G A C T C G A T G C A T C G T A A G C T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.51
Offset:8
Orientation:reverse strand
Alignment:AGGCTCCAGCVCGCCT
--------CNAGGCCT
 G T C A A C T G A C T G G T A C A C G T A T G C A G T C C G T A A C T G A G T C T C G A T A G C A C T G A G T C A G T C C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T

POL011.1_XCPE1/Jaspar

Match Rank:6
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:AGGCTCCAGCVCGCCT
--GGTCCCGCCC----
 G T C A A C T G A C T G G T A C A C G T A T G C A G T C C G T A A C T G A G T C T C G A T A G C A C T G A G T C A G T C C G A T
A C G T A C G T A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C A C G T A C G T A C G T A C G T

PB0180.1_Sp4_2/Jaspar

Match Rank:7
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:AGGCTCCAGCVCGCCT---
----NNGGCCACGCCTTTN
 G T C A A C T G A C T G G T A C A C G T A T G C A G T C C G T A A C T G A G T C T C G A T A G C A C T G A G T C A G T C C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

PB0164.1_Smad3_2/Jaspar

Match Rank:8
Score:0.50
Offset:4
Orientation:forward strand
Alignment:AGGCTCCAGCVCGCCT-----
----TACGCCCCGCCACTCTG
 G T C A A C T G A C T G G T A C A C G T A T G C A G T C C G T A A C T G A G T C T C G A T A G C A C T G A G T C A G T C C G A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

PB0009.1_E2F3_1/Jaspar

Match Rank:9
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:AGGCTCCAGCVCGCCT----
-----ANCGCGCGCCCTTNN
 G T C A A C T G A C T G G T A C A C G T A T G C A G T C C G T A A C T G A G T C T C G A T A G C A C T G A G T C A G T C C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:10
Score:0.49
Offset:10
Orientation:forward strand
Alignment:AGGCTCCAGCVCGCCT--
----------AGGCCTAG
 G T C A A C T G A C T G G T A C A C G T A T G C A G T C C G T A A C T G A G T C T C G A T A G C A C T G A G T C A G T C C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G