Information for 3-AACCACCTGCAGGTCA (Motif 6)

G T C A C G T A A G T C A G T C C G T A A T G C G T A C C G A T A T C G A T G C G T C A A C T G T A C G A G C T A G T C C T G A
Reverse Opposite:
A G C T A C T G T C G A A T G C A G T C C A G T A T C G A T G C C G T A A C T G A T C G A C G T A C T G T C A G A C G T A C G T
p-value:1e-14
log p-value:-3.237e+01
Information Content per bp:1.781
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.01%
Number of Background Sequences with motif4.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.1 +/- 21.9bp
Average Position of motif in Background40.7 +/- 18.9bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AACCACCTGCAGGTCA
SNGCACCTGCHS----
 G T C A C G T A A G T C A G T C C G T A A T G C G T A C C G A T A T C G A T G C G T C A A C T G T A C G A G C T A G T C C T G A
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T A C G T A C G T

FIGLA/MA0820.1/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AACCACCTGCAGGTCA
-ACCACCTGTT-----
 G T C A C G T A A G T C A G T C C G T A A T G C G T A C C G A T A T C G A T G C G T C A A C T G T A C G A G C T A G T C C T G A
A C G T G C T A G T A C A G T C G T C A A T G C T A G C C G A T C A T G A C G T C G A T A C G T A C G T A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AACCACCTGCAGGTCA
-NNCACCTGNN-----
 G T C A C G T A A G T C A G T C C G T A A T G C G T A C C G A T A T C G A T G C G T C A A C T G T A C G A G C T A G T C C T G A
A C G T A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T A C G T A C G T A C G T

TCF3/MA0522.2/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AACCACCTGCAGGTCA
-AACACCTGCT-----
 G T C A C G T A A G T C A G T C C G T A A T G C G T A C C G A T A T C G A T G C G T C A A C T G T A C G A G C T A G T C C T G A
A C G T G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T A C G T A C G T A C G T A C G T A C G T

CTCF/MA0139.1/Jaspar

Match Rank:5
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---AACCACCTGCAGGTCA
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T G T C A C G T A A G T C A G T C C G T A A T G C G T A C C G A T A T C G A T G C G T C A A C T G T A C G A G C T A G T C C T G A
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:6
Score:0.56
Offset:10
Orientation:forward strand
Alignment:AACCACCTGCAGGTCA
----------AGGTCA
 G T C A C G T A A G T C A G T C C G T A A T G C G T A C C G A T A T C G A T G C G T C A A C T G T A C G A G C T A G T C C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A

RORA/MA0071.1/Jaspar

Match Rank:7
Score:0.56
Offset:6
Orientation:forward strand
Alignment:AACCACCTGCAGGTCA
------ATCAAGGTCA
 G T C A C G T A A G T C A G T C C G T A A T G C G T A C C G A T A T C G A T G C G T C A A C T G T A C G A G C T A G T C C T G A
A C G T A C G T A C G T A C G T A C G T A C G T C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AACCACCTGCAGGTCA
AAACCACANN-------
 A C G T G T C A C G T A A G T C A G T C C G T A A T G C G T A C C G A T A T C G A T G C G T C A A C T G T A C G A G C T A G T C C T G A
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AACCACCTGCAGGTCA
NWAACCACADNN------
 A C G T A C G T G T C A C G T A A G T C A G T C C G T A A T G C G T A C C G A T A T C G A T G C G T C A A C T G T A C G A G C T A G T C C T G A
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T A C G T A C G T A C G T

MF0007.1_bHLH(zip)_class/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AACCACCTGCAGGTCA
-ACCACGTG-------
 G T C A C G T A A G T C A G T C C G T A A T G C G T A C C G A T A T C G A T G C G T C A A C T G T A C G A G C T A G T C C T G A
A C G T T C G A T A G C G A T C C T G A A T G C T A C G G C A T C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T