Information for 4-CCAYAYGCAGRCG (Motif 7)

A G T C A G T C C T G A A G T C T G C A A G T C A C T G A G T C C G T A A C T G C T A G A G T C A C T G
Reverse Opposite:
T A G C A C T G A G T C A G T C A C G T A C T G G T A C C T A G A C G T C T A G A G C T A C T G A C T G
p-value:1e-11
log p-value:-2.749e+01
Information Content per bp:1.879
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets61.0 +/- 23.1bp
Average Position of motif in Background71.7 +/- 23.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CCAYAYGCAGRCG
GCCACACCCA----
 A C G T A G T C A G T C C T G A A G T C T G C A A G T C A C T G A G T C C G T A A C T G C T A G A G T C A C T G
C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:CCAYAYGCAGRCG---
------CCAGACRSVB
 A G T C A G T C C T G A A G T C T G C A A G T C A C T G A G T C C G T A A C T G C T A G A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CCAYAYGCAGRCG
GGCCACACCCAN---
 A C G T A C G T A G T C A G T C C T G A A G T C T G C A A G T C A C T G A G T C C G T A A C T G C T A G A G T C A C T G
C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G A C G T A C G T A C G T

Bhlha15/MA0607.1/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CCAYAYGCAGRCG
CCATATGT-----
 A G T C A G T C C T G A A G T C T G C A A G T C A C T G A G T C C G T A A C T G C T A G A G T C A C T G
T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T A C G T A C G T A C G T A C G T A C G T

NRF1/MA0506.1/Jaspar

Match Rank:5
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CCAYAYGCAGRCG-
---TGCGCAGGCGC
 A G T C A G T C C T G A A G T C T G C A A G T C A C T G A G T C C G T A A C T G C T A G A G T C A C T G A C G T
A C G T A C G T A C G T A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:CCAYAYGCAGRCG-
------CCAGACAG
 A G T C A G T C C T G A A G T C T G C A A G T C A C T G A G T C C G T A A C T G C T A G A G T C A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

NEUROD2/MA0668.1/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CCAYAYGCAGRCG
GCCATATGGT----
 A C G T A G T C A G T C C T G A A G T C T G C A A G T C A C T G A G T C C G T A A C T G C T A G A G T C A C T G
T C A G T G A C A T G C C T G A A G C T T G C A A G C T A C T G A C T G G A C T A C G T A C G T A C G T A C G T

Klf1/MA0493.1/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CCAYAYGCAGRCG
GGCCACACCCA----
 A C G T A C G T A G T C A G T C C T G A A G T C T G C A A G T C A C T G A G T C C G T A A C T G C T A G A G T C A C T G
C T A G T C A G T G A C G A T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:9
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----CCAYAYGCAGRCG
NWAACCACADNN-----
 A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G T C T G C A A G T C A C T G A G T C C G T A A C T G C T A G A G T C A C T G
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T A C G T A C G T

Twist2/MA0633.1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CCAYAYGCAGRCG
ACCATATGTT----
 A C G T A G T C A G T C C T G A A G T C T G C A A G T C A C T G A G T C C G T A A C T G C T A G A G T C A C T G
C T G A G T A C A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T