Information for 22-AATCGGCTCG (Motif 38)

C G T A G T C A A C G T A G T C A T C G A T C G T G A C A G C T A T G C A C T G
Reverse Opposite:
A G T C A T C G C T G A A C T G T A G C T A G C A C T G T G C A A C G T G C A T
p-value:1e-4
log p-value:-9.761e+00
Information Content per bp:1.688
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.64%
Number of Background Sequences with motif191.3
Percentage of Background Sequences with motif0.40%
Average Position of motif in Targets56.2 +/- 24.5bp
Average Position of motif in Background52.7 +/- 31.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Crx/MA0467.1/Jaspar

Match Rank:1
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AATCGGCTCG
CTAATCCTCTT-
 A C G T A C G T C G T A G T C A A C G T A G T C A T C G A T C G T G A C A G C T A T G C A C T G
G A T C C G A T C T G A C G T A A C G T A G T C G A T C A G C T G A T C G A C T A G C T A C G T

OTX1/MA0711.1/Jaspar

Match Rank:2
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AATCGGCTCG
TTAATCCG----
 A C G T A C G T C G T A G T C A A C G T A G T C A T C G A T C G T G A C A G C T A T G C A C T G
G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G A C G T A C G T A C G T A C G T

GSC2/MA0891.1/Jaspar

Match Rank:3
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---AATCGGCTCG
CCTAATCCGC---
 A C G T A C G T A C G T C G T A G T C A A C G T A G T C A T C G A T C G T G A C A G C T A T G C A C T G
T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C A C G T A C G T A C G T

GATA5/MA0766.1/Jaspar

Match Rank:4
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---AATCGGCTCG
TCTTATCT-----
 A C G T A C G T A C G T C G T A G T C A A C G T A G T C A T C G A T C G T G A C A G C T A T G C A C T G
A G C T A T G C G A C T C G A T C G T A A G C T A G T C C G A T A C G T A C G T A C G T A C G T A C G T

POL001.1_MTE/Jaspar

Match Rank:5
Score:0.53
Offset:-6
Orientation:reverse strand
Alignment:------AATCGGCTCG---
NCGACCGCTCCGCTCGAAA
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A G T C A A C G T A G T C A T C G A T C G T G A C A G C T A T G C A C T G A C G T A C G T A C G T
T C A G A T G C C T A G C G T A A T G C A G T C A C T G G A C T A C G T A T G C A T G C A C T G A G T C A C G T A G T C A C T G C T G A C T G A T C G A

Tcfl5/MA0632.1/Jaspar

Match Rank:6
Score:0.53
Offset:4
Orientation:forward strand
Alignment:AATCGGCTCG----
----GGCACGTGCC
 C G T A G T C A A C G T A G T C A T C G A T C G T G A C A G C T A T G C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G A C T G G T A C C T G A A G T C T C A G G A C T C A T G T G A C G A T C

OTX2/MA0712.1/Jaspar

Match Rank:7
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--AATCGGCTCG
TTAATCCT----
 A C G T A C G T C G T A G T C A A C G T A G T C A T C G A T C G T G A C A G C T A T G C A C T G
G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T A C G T A C G T A C G T A C G T

PH0129.1_Otx1/Jaspar

Match Rank:8
Score:0.52
Offset:-7
Orientation:reverse strand
Alignment:-------AATCGGCTCG
NNNAATTAATCCCCNCN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A G T C A A C G T A G T C A T C G A T C G T G A C A G C T A T G C A C T G
T C G A C G A T C G T A C G T A C T G A G A C T C G A T C G T A C G T A A C G T G A T C A G T C A T G C A G T C G C A T G T A C G A C T

PB0185.1_Tcf1_2/Jaspar

Match Rank:9
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---AATCGGCTCG-
NNTAATCCNGNCNN
 A C G T A C G T A C G T C G T A G T C A A C G T A G T C A T C G A T C G T G A C A G C T A T G C A C T G A C G T
G A T C G T A C G C A T T G C A G T C A G A C T G T A C A G T C T C A G A T C G C T A G A G T C T G C A C G T A

PB0105.1_Arid3a_2/Jaspar

Match Rank:10
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----AATCGGCTCG
ACCCGTATCAAATTT
 A C G T A C G T A C G T A C G T A C G T C G T A G T C A A C G T A G T C A T C G A T C G T G A C A G C T A T G C A C T G
G T C A G T A C T G A C T A G C T C A G A G C T T C G A A G C T T A G C C T G A C G T A T C G A C G A T G A C T C A G T