Information for 12-TTGTSTSTKGWGGCCW (Motif 27)

C G A T A C G T A T C G A G C T T A C G A C G T A T G C A C G T A C T G A T C G C G A T A C T G A C T G A G T C A G T C G C T A
Reverse Opposite:
C G A T A C T G A C T G A G T C A G T C C G T A A T G C G T A C C G T A A T C G C G T A A T C G C T G A A T G C G T C A C G T A
p-value:1e-8
log p-value:-1.988e+01
Information Content per bp:1.836
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.2 +/- 28.6bp
Average Position of motif in Background76.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TTGTSTSTKGWGGCCW
NNTGTTTATTTTGGCA-
 A C G T C G A T A C G T A T C G A G C T T A C G A C G T A T G C A C G T A C T G A T C G C G A T A C T G A C T G A G T C A G T C G C T A
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.54
Offset:10
Orientation:forward strand
Alignment:TTGTSTSTKGWGGCCW--
----------AGGCCTAG
 C G A T A C G T A T C G A G C T T A C G A C G T A T G C A C G T A C T G A T C G C G A T A C T G A C T G A G T C A G T C G C T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.54
Offset:10
Orientation:forward strand
Alignment:TTGTSTSTKGWGGCCW--
----------AGGCCTNG
 C G A T A C G T A T C G A G C T T A C G A C G T A T G C A C G T A C T G A T C G C G A T A C T G A C T G A G T C A G T C G C T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

PB0166.1_Sox12_2/Jaspar

Match Rank:4
Score:0.53
Offset:-6
Orientation:reverse strand
Alignment:------TTGTSTSTKGWGGCCW
ANTCCTTTGTCTNNNN------
 A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T A T C G A G C T T A C G A C G T A T G C A C G T A C T G A T C G C G A T A C T G A C T G A G T C A G T C G C T A
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:5
Score:0.53
Offset:-6
Orientation:reverse strand
Alignment:------TTGTSTSTKGWGGCCW
NNNCCATTGTGTNAN-------
 A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T A T C G A G C T T A C G A C G T A T G C A C G T A C T G A T C G C G A T A C T G A C T G A G T C A G T C G C T A
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0177.1_Sox7_2/Jaspar

Match Rank:6
Score:0.50
Offset:-7
Orientation:forward strand
Alignment:-------TTGTSTSTKGWGGCCW
GTGCTAATTGTGTGTGTACGCT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T A T C G A G C T T A C G A C G T A T G C A C G T A C T G A T C G C G A T A C T G A C T G A G T C A G T C G C T A
A C T G C G A T T A C G A T G C C G A T G T C A C G T A G C A T G C A T T C A G G C A T T A C G G A C T T A C G G C A T T C A G A C G T C T G A G A T C A C T G T A G C A G C T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:7
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---TTGTSTSTKGWGGCCW
CCATTGTTNY---------
 A C G T A C G T A C G T C G A T A C G T A T C G A G C T T A C G A C G T A T G C A C G T A C T G A T C G C G A T A C T G A C T G A G T C A G T C G C T A
A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:8
Score:0.49
Offset:1
Orientation:forward strand
Alignment:TTGTSTSTKGWGGCCW
-GGTCANYTGAGGWCA
 C G A T A C G T A T C G A G C T T A C G A C G T A T G C A C G T A C T G A T C G C G A T A C T G A C T G A G T C A G T C G C T A
A C G T C T A G C A T G A C G T A G T C G C T A A G C T A G T C A G C T T C A G C T G A A C T G C A T G G C A T A T G C C G T A

Sox17/MA0078.1/Jaspar

Match Rank:9
Score:0.49
Offset:-4
Orientation:forward strand
Alignment:----TTGTSTSTKGWGGCCW
CTCATTGTC-----------
 A C G T A C G T A C G T A C G T C G A T A C G T A T C G A G C T T A C G A C G T A T G C A C G T A C T G A T C G C G A T A C T G A C T G A G T C A G T C G C T A
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:10
Score:0.48
Offset:9
Orientation:reverse strand
Alignment:TTGTSTSTKGWGGCCW-------
---------CAGGCCNNGGCCNN
 C G A T A C G T A T C G A G C T T A C G A C G T A T G C A C G T A C T G A T C G C G A T A C T G A C T G A G T C A G T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C