p-value: | 1e-11 |
log p-value: | -2.567e+01 |
Information Content per bp: | 1.840 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.68% |
Number of Background Sequences with motif | 1.0 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 53.8 +/- 13.3bp |
Average Position of motif in Background | 43.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 0.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
SD0003.1_at_AC_acceptor/Jaspar
Match Rank: | 1 |
Score: | 0.53 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---AAAKMCTTWRMAAWGC AAGATATCCTT-------- |
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PH0117.1_Nkx3-1/Jaspar
Match Rank: | 2 |
Score: | 0.53 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----AAAKMCTTWRMAAWGC TACTAAGTACTTAAATG--- |
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PH0112.1_Nkx2-3/Jaspar
Match Rank: | 3 |
Score: | 0.52 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----AAAKMCTTWRMAAWGC CNTTAAGTACTTAANG---- |
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CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer
Match Rank: | 4 |
Score: | 0.52 |
Offset: | -6 |
Orientation: | forward strand |
Alignment: | ------AAAKMCTTWRMAAWGC NTNATGCAAYMNNHTGMAAY-- |
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PB0136.1_IRC900814_2/Jaspar
Match Rank: | 5 |
Score: | 0.51 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----AAAKMCTTWRMAAWGC ATGGAAAGTCGTAAAA---- |
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PH0116.1_Nkx2-9/Jaspar
Match Rank: | 6 |
Score: | 0.50 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----AAAKMCTTWRMAAWGC NATTTAAGTACTTNAAA---- |
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Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer
Match Rank: | 7 |
Score: | 0.50 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | AAAKMCTTWRMAAWGC ----CCTTTGATGT-- |
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Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer
Match Rank: | 8 |
Score: | 0.50 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | AAAKMCTTWRMAAWGC AAACMATTAN------ |
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PH0004.1_Nkx3-2/Jaspar
Match Rank: | 9 |
Score: | 0.49 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---AAAKMCTTWRMAAWGC CATAACCACTTAACAAC-- |
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Pou5f1::Sox2/MA0142.1/Jaspar
Match Rank: | 10 |
Score: | 0.49 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | AAAKMCTTWRMAAWGC---- -----CTTTGTTATGCAAAT |
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