Information for 6-GCTGACATGTGGCAGG (Motif 7)

C A T G T G A C C G A T T C A G C T G A A T G C G T C A A C G T A T C G C G A T A C T G C T A G T G A C T C G A C T A G T A C G
Reverse Opposite:
A T G C G A T C A G C T A C T G G A T C T G A C C G T A T A G C T G C A C A G T T A C G G A C T A G T C G C T A A C T G G A T C
p-value:1e-12
log p-value:-2.843e+01
Information Content per bp:1.551
Number of Target Sequences with motif63.0
Percentage of Target Sequences with motif8.16%
Number of Background Sequences with motif1378.4
Percentage of Background Sequences with motif2.89%
Average Position of motif in Targets44.3 +/- 23.4bp
Average Position of motif in Background49.5 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PKNOX2/MA0783.1/Jaspar

Match Rank:1
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GCTGACATGTGGCAGG
--TGACAGGTGTCA--
 C A T G T G A C C G A T T C A G C T G A A T G C G T C A A C G T A T C G C G A T A C T G C T A G T G A C T C G A C T A G T A C G
A C G T A C G T C G A T T A C G C T G A A G T C C G T A C A T G T A C G A G C T T C A G G A C T T G A C C T G A A C G T A C G T

TGIF2/MA0797.1/Jaspar

Match Rank:2
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GCTGACATGTGGCAGG
--TGACAGCTGTCA--
 C A T G T G A C C G A T T C A G C T G A A T G C G T C A A C G T A T C G C G A T A C T G C T A G T G A C T C G A C T A G T A C G
A C G T A C G T G C A T C T A G C T G A G A T C C T G A C A T G T A G C G A C T C T A G G A C T A T G C C G T A A C G T A C G T

PKNOX1/MA0782.1/Jaspar

Match Rank:3
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GCTGACATGTGGCAGG
--TGACAGGTGTCA--
 C A T G T G A C C G A T T C A G C T G A A T G C G T C A A C G T A T C G C G A T A C T G C T A G T G A C T C G A C T A G T A C G
A C G T A C G T G A C T T A C G C T G A G T A C C T G A C A T G T A C G A G C T T C A G G C A T T A G C C G T A A C G T A C G T

TGIF1/MA0796.1/Jaspar

Match Rank:4
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GCTGACATGTGGCAGG
--TGACAGCTGTCA--
 C A T G T G A C C G A T T C A G C T G A A T G C G T C A A C G T A T C G C G A T A C T G C T A G T G A C T C G A C T A G T A C G
A C G T A C G T G C A T T C A G T C G A A G T C T C G A A C T G T A G C A G C T T A C G G C A T G T A C C G T A A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:5
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----GCTGACATGTGGCAGG
AATTTGCTGAC----------
 A C G T A C G T A C G T A C G T A C G T C A T G T G A C C G A T T C A G C T G A A T G C G T C A A C G T A T C G C G A T A C T G C T A G T G A C T C G A C T A G T A C G
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:6
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GCTGACATGTGGCAGG
GGTGYTGACAGS-------
 A C G T A C G T A C G T C A T G T G A C C G A T T C A G C T G A A T G C G T C A A C G T A T C G C G A T A C T G C T A G T G A C T C G A C T A G T A C G
T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GCTGACATGTGGCAGG
VGCTGWCAVB-------
 A C G T C A T G T G A C C G A T T C A G C T G A A T G C G T C A A C G T A T C G C G A T A C T G C T A G T G A C T C G A C T A G T A C G
T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Mafb/MA0117.2/Jaspar

Match Rank:8
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----GCTGACATGTGGCAGG
AAAATGCTGACT---------
 A C G T A C G T A C G T A C G T A C G T C A T G T G A C C G A T T C A G C T G A A T G C G T C A A C G T A T C G C G A T A C T G C T A G T G A C T C G A C T A G T A C G
C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GCTGACATGTGGCAGG-
--TGACANARRCCAGRC
 C A T G T G A C C G A T T C A G C T G A A T G C G T C A A C G T A T C G C G A T A C T G C T A G T G A C T C G A C T A G T A C G A C G T
A C G T A C G T C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCTGACATGTGGCAGG
ARNTGACA---------
 A C G T C A T G T G A C C G A T T C A G C T G A A T G C G T C A A C G T A T C G C G A T A C T G C T A G T G A C T C G A C T A G T A C G
T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T