Information for 17-CATTTATCTGTGA (Motif 23)

A G T C C G T A A C G T A C G T A C G T G T C A A C G T A T G C A C G T A C T G C G A T A C T G C T G A
Reverse Opposite:
A G C T A G T C C G T A A G T C C G T A A T C G C G T A A C G T C G T A C G T A G T C A A C G T A C T G
p-value:1e-8
log p-value:-1.923e+01
Information Content per bp:1.885
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.4 +/- 22.8bp
Average Position of motif in Background55.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

T/MA0009.2/Jaspar

Match Rank:1
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CATTTATCTGTGA
TCACACCTAGGTGTGA
 A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C G T G T C A A C G T A T G C A C G T A C T G C G A T A C T G C T G A
G A C T T G A C C T G A A G T C C T G A G A T C T G A C G C A T C T G A A C T G C T A G A G C T C T A G G A C T A C T G C T G A

TBX19/MA0804.1/Jaspar

Match Rank:2
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CATTTATCTGTGA--
TTTCACACCTAGGTGTGAAA
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C G T G T C A A C G T A T G C A C G T A C T G C G A T A C T G C T G A A C G T A C G T
C G A T C A G T G A C T T G A C C T G A A G T C T C G A G A T C T G A C G C A T C T G A A C T G C T A G A G C T C T A G G A C T A C T G C T G A G C T A G C T A

Gata1/MA0035.3/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CATTTATCTGTGA
TTCTTATCTGT--
 A G T C C G T A A C G T A C G T A C G T G T C A A C G T A T G C A C G T A C T G C G A T A C T G C T G A
A G C T A G C T A G T C A G C T A C G T C G T A A C G T A G T C C G A T A T C G G A C T A C G T A C G T

GATA3/MA0037.2/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CATTTATCTGTGA
-TCTTATCT----
 A G T C C G T A A C G T A C G T A C G T G T C A A C G T A T G C A C G T A C T G C G A T A C T G C T G A
A C G T A G C T A G T C A C G T A C G T C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T

PAX9/MA0781.1/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CATTTATCTGTGA--
TGCAGTCATGCGTGACG
 A C G T A C G T A G T C C G T A A C G T A C G T A C G T G T C A A C G T A T G C A C G T A C T G C G A T A C T G C T G A A C G T A C G T
C A G T A C T G G T A C C T G A A T C G A G C T A T G C C T G A C G A T A T C G A G T C C T A G A C G T C T A G C G T A G T A C T A C G

BARHL2/MA0635.1/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CATTTATCTGTGA
ANCGTTTANN-----
 A C G T A C G T A G T C C G T A A C G T A C G T A C G T G T C A A C G T A T G C A C G T A C T G C G A T A C T G C T G A
C T G A A G T C G A T C C T A G G C A T A C G T C G A T C G T A C T A G A T G C A C G T A C G T A C G T A C G T A C G T

Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer

Match Rank:7
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----CATTTATCTGTGA---
NTTMRCACNNNVSTGYKAANT
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C G T G T C A A C G T A T G C A C G T A C T G C G A T A C T G C T G A A C G T A C G T A C G T
G C A T A G C T G A C T T G C A C T G A T A G C C T G A A T G C G A T C A G C T T G C A T C A G A T C G G A C T T A C G G A C T A C T G C T G A C T G A G C T A G C A T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CATTTATCTGTGA
-YSTTATCT----
 A G T C C G T A A C G T A C G T A C G T G T C A A C G T A T G C A C G T A C T G C G A T A C T G C T G A
A C G T A G C T A T C G A G C T C G A T C T G A C G A T A T G C C G A T A C G T A C G T A C G T A C G T

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CATTTATCTGTGA
NCCTTATCTG---
 A G T C C G T A A C G T A C G T A C G T G T C A A C G T A T G C A C G T A C T G C G A T A C T G C T G A
A G C T A G T C A T G C A C G T A C G T C G T A A C G T A G T C C G A T A T C G A C G T A C G T A C G T

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CATTTATCTGTGA
NNCTTATCTN---
 A G T C C G T A A C G T A C G T A C G T G T C A A C G T A T G C A C G T A C T G C G A T A C T G C T G A
A G C T A G T C A T G C A G C T A C G T C G T A A C G T A G T C C G A T A T G C A C G T A C G T A C G T