Information for 4-CWGCCGRRGARAMTGG (Motif 20)

A G T C G C T A A C T G A G T C A G T C C T A G C T G A C T A G A C T G C G T A C T A G C G T A T G A C A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C G T C A A C T G A C G T A G T C A C G T A G T C A G T C A G C T A G T C C T A G A C T G A G T C C G A T A C T G
p-value:1e-9
log p-value:-2.140e+01
Information Content per bp:1.860
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets38.6 +/- 12.5bp
Average Position of motif in Background50.7 +/- 4.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0137.1_Irf3_2/Jaspar

Match Rank:1
Score:0.53
Offset:7
Orientation:forward strand
Alignment:CWGCCGRRGARAMTGG-----
-------GGAGAAAGGTGCGA
 A G T C G C T A A C T G A G T C A G T C C T A G C T G A C T A G A C T G C G T A C T A G C G T A T G A C A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

Sox6/MA0515.1/Jaspar

Match Rank:2
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:CWGCCGRRGARAMTGG
------AAAACAATGG
 A G T C G C T A A C T G A G T C A G T C C T A G C T G A C T A G A C T G C G T A C T A G C G T A T G A C A C G T A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:3
Score:0.50
Offset:7
Orientation:forward strand
Alignment:CWGCCGRRGARAMTGG-
-------RAACAATGGN
 A G T C G C T A A C T G A G T C A G T C C T A G C T G A C T A G A C T G C G T A C T A G C G T A T G A C A C G T A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.49
Offset:6
Orientation:reverse strand
Alignment:CWGCCGRRGARAMTGG
------VRAACAATGG
 A G T C G C T A A C T G A G T C A G T C C T A G C T G A C T A G A C T G C G T A C T A G C G T A T G A C A C G T A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G

PB0124.1_Gabpa_2/Jaspar

Match Rank:5
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:CWGCCGRRGARAMTGG
NNNNGGGGGAAGANGG
 A G T C G C T A A C T G A G T C A G T C C T A G C T G A C T A G A C T G C G T A C T A G C G T A T G A C A C G T A C T G A C T G
C T A G A C G T A T C G T C G A C T A G C A T G T A C G C T A G C T A G C T G A C G T A C T A G T G C A G A T C C T A G A C T G

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.48
Offset:-1
Orientation:reverse strand
Alignment:-CWGCCGRRGARAMTGG---
YCAGGCWCAGTACCAGGCTC
 A C G T A G T C G C T A A C T G A G T C A G T C C T A G C T G A C T A G A C T G C G T A C T A G C G T A T G A C A C G T A C T G A C T G A C G T A C G T A C G T
A G T C T G A C G C T A C T A G C T A G G A T C G C A T A T G C C G T A C T A G C A G T T C G A A T G C A G T C C G T A C A T G C T A G G T A C G A C T A T G C

PB0132.1_Hbp1_2/Jaspar

Match Rank:7
Score:0.48
Offset:4
Orientation:reverse strand
Alignment:CWGCCGRRGARAMTGG-----
----NNTNNACAATGGGANNN
 A G T C G C T A A C T G A G T C A G T C C T A G C T G A C T A G A C T G C G T A C T A G C G T A T G A C A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.47
Offset:-2
Orientation:forward strand
Alignment:--CWGCCGRRGARAMTGG
CACAGCAGGGGG------
 A C G T A C G T A G T C G C T A A C T G A G T C A G T C C T A G C T G A C T A G A C T G C G T A C T A G C G T A T G A C A C G T A C T G A C T G
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T A C G T A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.47
Offset:7
Orientation:reverse strand
Alignment:CWGCCGRRGARAMTGG-
-------GAACAATGGN
 A G T C G C T A A C T G A G T C A G T C C T A G C T G A C T A G A C T G C G T A C T A G C G T A T G A C A C G T A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G

Sox2/MA0143.3/Jaspar

Match Rank:10
Score:0.47
Offset:8
Orientation:reverse strand
Alignment:CWGCCGRRGARAMTGG
--------AACAAAGG
 A G T C G C T A A C T G A G T C A G T C C T A G C T G A C T A G A C T G C G T A C T A G C G T A T G A C A C G T A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G