p-value: | 1e-8 |
log p-value: | -1.920e+01 |
Information Content per bp: | 1.530 |
Number of Target Sequences with motif | 4.0 |
Percentage of Target Sequences with motif | 0.46% |
Number of Background Sequences with motif | 0.5 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 29.0 +/- 14.6bp |
Average Position of motif in Background | 36.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 1.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 1 |
Score: | 0.58 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | CTCGCCGGTCTGGCGC -----CTGTCTGG--- |
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Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 2 |
Score: | 0.57 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | CTCGCCGGTCTGGCGC ---VBSYGTCTGG--- |
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Hand1::Tcf3/MA0092.1/Jaspar
Match Rank: | 3 |
Score: | 0.56 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | CTCGCCGGTCTGGCGC ------GGTCTGGCAT |
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Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer
Match Rank: | 4 |
Score: | 0.55 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | CTCGCCGGTCTGGCGC-- ------TGTCTGDCACCT |
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SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar
Match Rank: | 5 |
Score: | 0.54 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | CTCGCCGGTCTGGCGC-- -----CTGTCTGTCACCT |
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PB0060.1_Smad3_1/Jaspar
Match Rank: | 6 |
Score: | 0.54 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CTCGCCGGTCTGGCGC-- -NNTNNTGTCTGGNNTNG |
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PB0113.1_E2F3_2/Jaspar
Match Rank: | 7 |
Score: | 0.53 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | CTCGCCGGTCTGGCGC------ -----NNNNTTGGCGCCGANNN |
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E2F1/MA0024.3/Jaspar
Match Rank: | 8 |
Score: | 0.52 |
Offset: | 8 |
Orientation: | reverse strand |
Alignment: | CTCGCCGGTCTGGCGC---- --------TTTGGCGCCAAA |
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PB0112.1_E2F2_2/Jaspar
Match Rank: | 9 |
Score: | 0.52 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | CTCGCCGGTCTGGCGC------ -----NNNNTTGGCGCCGANNN |
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PB0164.1_Smad3_2/Jaspar
Match Rank: | 10 |
Score: | 0.51 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----CTCGCCGGTCTGGCGC TACGCCCCGCCACTCTG---- |
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