Information for 13-TCTGACAGAG (Motif 13)

A C G T G T A C A C G T A T C G C G T A A G T C C G T A T C A G G T C A T A C G
Reverse Opposite:
A T G C C A G T A G T C A C G T A C T G C G A T A T G C C G T A A C T G C G T A
p-value:1e-9
log p-value:-2.148e+01
Information Content per bp:1.849
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.49%
Number of Background Sequences with motif65.2
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets48.4 +/- 27.4bp
Average Position of motif in Background47.7 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS1/MA0498.2/Jaspar

Match Rank:1
Score:0.76
Offset:1
Orientation:forward strand
Alignment:TCTGACAGAG
-TTGACAG--
A C G T G T A C A C G T A T C G C G T A A G T C C G T A T C A G G T C A T A C G
A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:2
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:TCTGACAGAG
RHTGWCAR--
A C G T G T A C A C G T A T C G C G T A A G T C C G T A T C A G G T C A T A C G
C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:3
Score:0.73
Offset:1
Orientation:forward strand
Alignment:TCTGACAGAG
-TTGACAGC-
A C G T G T A C A C G T A T C G C G T A A G T C C G T A T C A G G T C A T A C G
A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:4
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-TCTGACAGAG
ARNTGACA---
A C G T A C G T G T A C A C G T A T C G C G T A A G T C C G T A T C A G G T C A T A C G
T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:5
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-TCTGACAGAG
VGCTGWCAVB-
A C G T A C G T G T A C A C G T A T C G C G T A A G T C C G T A T C A G G T C A T A C G
T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:6
Score:0.70
Offset:1
Orientation:forward strand
Alignment:TCTGACAGAG
-TTGACAGG-
A C G T G T A C A C G T A T C G C G T A A G T C C G T A T C A G G T C A T A C G
A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:7
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---TCTGACAGAG----
GATATTGACAGCTGCGT
A C G T A C G T A C G T A C G T G T A C A C G T A T C G C G T A A G T C C G T A T C A G G T C A T A C G A C G T A C G T A C G T A C G T
C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TCTGACAGAG
TGTCTGDCACCT
A C G T A C G T A C G T G T A C A C G T A T C G C G T A A G T C C G T A T C A G G T C A T A C G
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

PH0105.1_Meis3/Jaspar

Match Rank:9
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TCTGACAGAG----
GTATTGACAGGTNNTT
A C G T A C G T A C G T G T A C A C G T A T C G C G T A A G T C C G T A T C A G G T C A T A C G A C G T A C G T A C G T A C G T
C A T G A C G T C G T A C G A T G A C T A C T G C G T A A G T C C T G A C T A G T A C G G A C T T G C A G C T A G A C T G C A T

PH0170.1_Tgif2/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TCTGACAGAG----
GTATTGACAGCTNNTT
A C G T A C G T A C G T G T A C A C G T A T C G C G T A A G T C C G T A T C A G G T C A T A C G A C G T A C G T A C G T A C G T
A C T G A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C A T G T A G C G A C T T C G A T A C G G C A T C G A T