Information for 10-CASAATTGCWGSAAAG (Motif 9)

A G T C C G T A T A G C C G T A C T G A A C G T C G A T T A C G A G T C C G T A C T A G T A G C C G T A G T C A C G T A C A T G
Reverse Opposite:
G T A C A C G T A C G T C G A T A T C G A G T C C G A T C T A G A T G C C G T A T G C A A G C T A C G T A T C G A C G T A C T G
p-value:1e-13
log p-value:-3.138e+01
Information Content per bp:1.773
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets66.0 +/- 15.9bp
Average Position of motif in Background31.8 +/- 4.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0168.1_Sox14_2/Jaspar

Match Rank:1
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CASAATTGCWGSAAAG
CTCACACAATGGCGC-----
 A C G T A C G T A C G T A C G T A G T C C G T A T A G C C G T A C T G A A C G T C G A T T A C G A G T C C G T A C T A G T A G C C G T A G T C A C G T A C A T G
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C A C G T A C G T A C G T A C G T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:2
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CASAATTGCWGSAAAG-
--CAATTGCAAAAATAT
 A G T C C G T A T A G C C G T A C T G A A C G T C G A T T A C G A G T C C G T A C T A G T A G C C G T A G T C A C G T A C A T G A C G T
A C G T A C G T G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T

STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer

Match Rank:3
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CASAATTGCWGSAAAG
--NATTTCCNGGAAAT
 A G T C C G T A T A G C C G T A C T G A A C G T C G A T T A C G A G T C C G T A C T A G T A G C C G T A G T C A C G T A C A T G
A C G T A C G T A T G C C T G A G A C T A C G T A C G T G T A C G A T C C G A T C T A G C A T G C G T A C G T A C T G A G A C T

BCL6B/MA0731.1/Jaspar

Match Rank:4
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CASAATTGCWGSAAAG--
-TGAATTCCTAGAAAGCA
 A G T C C G T A T A G C C G T A C T G A A C G T C G A T T A C G A G T C C G T A C T A G T A G C C G T A G T C A C G T A C A T G A C G T A C G T
A C G T A C G T A C T G C T G A C T G A A C G T A G C T A G T C A G T C A C G T T G C A A C T G G T C A C G T A C G T A C T A G G A T C C T G A

PB0146.1_Mafk_2/Jaspar

Match Rank:5
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CASAATTGCWGSAAAG
GAAAAAATTGCAAGG---
 A C G T A C G T A G T C C G T A T A G C C G T A C T G A A C G T C G A T T A C G A G T C C G T A C T A G T A G C C G T A G T C A C G T A C A T G
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G A C G T A C G T A C G T

PB0175.1_Sox4_2/Jaspar

Match Rank:6
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CASAATTGCWGSAAAG
GGAAAAATTGTTAGGAA-
 A C G T A C G T A G T C C G T A T A G C C G T A C T G A A C G T C G A T T A C G A G T C C G T A C T A G T A G C C G T A G T C A C G T A C A T G
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A A C G T

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:7
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CASAATTGCWGSAAAG---
----TTTCCTGGAAAGNNN
 A G T C C G T A T A G C C G T A C T G A A C G T C G A T T A C G A G T C C G T A C T A G T A G C C G T A G T C A C G T A C A T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T A G C T A G C T G A T C G A T C G C A T C T A G T C A G T C G A T C G A C T G A C T A G A G T C G C T A C T G A

PB0006.1_Bcl6b_1/Jaspar

Match Rank:8
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CASAATTGCWGSAAAG-
-NNNATTCCTCGAAAGN
 A G T C C G T A T A G C C G T A C T G A A C G T C G A T T A C G A G T C C G T A C T A G T A G C C G T A G T C A C G T A C A T G A C G T
A C G T A T G C C T G A C G T A C G T A C G A T G C A T G T A C A G T C G C A T T G A C C T A G G C T A C G T A C T G A C T A G G C T A

PB0183.1_Sry_2/Jaspar

Match Rank:9
Score:0.52
Offset:-6
Orientation:forward strand
Alignment:------CASAATTGCWGSAAAG
TCACGGAACAATAGGTG-----
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A T A G C C G T A C T G A A C G T C G A T T A C G A G T C C G T A C T A G T A G C C G T A G T C A C G T A C A T G
G A C T G A T C C G T A G T A C C A T G T C A G T G C A C G T A A G T C C T G A C G T A G C A T C T G A C T A G T C A G G A C T T A C G A C G T A C G T A C G T A C G T A C G T

PB0165.1_Sox11_2/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CASAATTGCWGSAAAG
-AAAATTGTTATGAA-
 A G T C C G T A T A G C C G T A C T G A A C G T C G A T T A C G A G T C C G T A C T A G T A G C C G T A G T C A C G T A C A T G
A C G T C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A A C G T