Information for 14-TAMTRCAKCARTG (Motif 26)

A C G T C G T A T G C A A C G T C T A G A G T C C G T A A C T G A G T C C G T A C T G A C G A T A C T G
Reverse Opposite:
A G T C C G T A A G C T A C G T A C T G G T A C A C G T A C T G A G T C C G T A A C G T A C G T C G T A
p-value:1e-8
log p-value:-1.998e+01
Information Content per bp:1.873
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.0 +/- 12.2bp
Average Position of motif in Background64.9 +/- 40.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:1
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TAMTRCAKCARTG
-ATTGCATCAK--
 A C G T C G T A T G C A A C G T C T A G A G T C C G T A A C T G A G T C C G T A C T G A C G A T A C T G
A C G T T C G A A C G T A C G T C T A G A G T C T C G A G C A T G T A C C T G A A C G T A C G T A C G T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TAMTRCAKCARTG
-ATTGCATCAT--
 A C G T C G T A T G C A A C G T C T A G A G T C C G T A A C T G A G T C C G T A C T G A C G A T A C T G
A C G T T C G A G C A T A C G T C T A G G T A C T C G A G C A T T G A C T C G A A C G T A C G T A C G T

PH0134.1_Pbx1/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TAMTRCAKCARTG----
TCACCCATCAATAAACA
 A C G T C G T A T G C A A C G T C T A G A G T C C G T A A C T G A G T C C G T A C T G A C G A T A C T G A C G T A C G T A C G T A C G T
G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A

PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer

Match Rank:4
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TAMTRCAKCARTG------
TTTMCGCTTSABTGAACACN
 A C G T A C G T C G T A T G C A A C G T C T A G A G T C C G T A A C T G A G T C C G T A C T G A C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A G C T C A G T G A C T T G A C G A T C T C A G A T G C G C A T A G C T T A C G C T G A A T C G G A C T C T A G T G C A T C G A A G T C G C T A A T G C T C G A

ATF4/MA0833.1/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TAMTRCAKCARTG
TATTGCATCATCC
 A C G T C G T A T G C A A C G T C T A G A G T C C G T A A C T G A G T C C G T A C T G A C G A T A C T G
A C G T T C G A C G A T C A G T C T A G G T A C T C G A C G A T G A T C G T C A A C G T G T A C G A T C

DMRT3/MA0610.1/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TAMTRCAKCARTG
-AATGTATCAAT-
 A C G T C G T A T G C A A C G T C T A G A G T C C G T A A C T G A G T C C G T A C T G A C G A T A C T G
A C G T G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T A C G T

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TAMTRCAKCARTG
GYCATCMATCAT--
 A C G T A C G T C G T A T G C A A C G T C T A G A G T C C G T A A C T G A G T C C G T A C T G A C G A T A C T G
T A C G G A C T T G A C C G T A A C G T G A T C G T C A C G T A A C G T A T G C C G T A G A C T A C G T A C G T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:8
Score:0.53
Offset:2
Orientation:forward strand
Alignment:TAMTRCAKCARTG
--HNRAATCAAT-
 A C G T C G T A T G C A A C G T C T A G A G T C C G T A A C T G A G T C C G T A C T G A C G A T A C T G
A C G T A C G T G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T A C G T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:TAMTRCAKCARTG
--TTGCAACATN-
 A C G T C G T A T G C A A C G T C T A G A G T C C G T A A C T G A G T C C G T A C T G A C G A T A C T G
A C G T A C G T C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C A C G T

PB0082.1_Tcf3_1/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:forward strand
Alignment:TAMTRCAKCARTG-----
-TATAGATCAAAGGAAAA
 A C G T C G T A T G C A A C G T C T A G A G T C C G T A A C T G A G T C C G T A C T G A C G A T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A