p-value: | 1e-9 |
log p-value: | -2.219e+01 |
Information Content per bp: | 1.749 |
Number of Target Sequences with motif | 7.0 |
Percentage of Target Sequences with motif | 0.91% |
Number of Background Sequences with motif | 10.0 |
Percentage of Background Sequences with motif | 0.02% |
Average Position of motif in Targets | 56.0 +/- 26.3bp |
Average Position of motif in Background | 43.8 +/- 16.0bp |
Strand Bias (log2 ratio + to - strand density) | -0.4 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 1 |
Score: | 0.58 |
Offset: | 9 |
Orientation: | reverse strand |
Alignment: | AGGCTAGGACCAGMCA- ---------BCAGACWA |
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PB0060.1_Smad3_1/Jaspar
Match Rank: | 2 |
Score: | 0.58 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | AGGCTAGGACCAGMCA----- ----CAAATCCAGACATCACA |
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Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 3 |
Score: | 0.57 |
Offset: | 9 |
Orientation: | reverse strand |
Alignment: | AGGCTAGGACCAGMCA- ---------CCAGACAG |
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Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 4 |
Score: | 0.55 |
Offset: | 9 |
Orientation: | reverse strand |
Alignment: | AGGCTAGGACCAGMCA--- ---------CCAGACRSVB |
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SD0002.1_at_AC_acceptor/Jaspar
Match Rank: | 5 |
Score: | 0.53 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -AGGCTAGGACCAGMCA AAGGCAAGTGT------ |
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GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer
Match Rank: | 6 |
Score: | 0.53 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | AGGCTAGGACCAGMCA-- ------GGACCACCCACG |
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Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer
Match Rank: | 7 |
Score: | 0.52 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | AGGCTAGGACCAGMCA ----AGGTGHCAGACA |
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Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer
Match Rank: | 8 |
Score: | 0.51 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | AGGCTAGGACCAGMCA TGACANARRCCAGRC- |
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SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar
Match Rank: | 9 |
Score: | 0.50 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | AGGCTAGGACCAGMCA- ----AGGTGNCAGACAG |
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ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer
Match Rank: | 10 |
Score: | 0.49 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | AGGCTAGGACCAGMCA -----TGGAACAGMA- |
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