Information for 13-AGCTCYAAAASAGRGM (Motif 14)

C T G A A C T G A G T C G A C T A G T C G A C T C G T A C G T A G C T A C T G A A T C G C G T A A C T G C T A G C T A G G T C A
Reverse Opposite:
A C G T A G T C A G T C T A G C G A C T T A G C A G C T C G A T A C G T A C G T C T G A A C T G C G T A C T A G G T A C A G C T
p-value:1e-11
log p-value:-2.545e+01
Information Content per bp:1.756
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets36.8 +/- 26.9bp
Average Position of motif in Background12.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TATA-Box(TBP)/Promoter/Homer

Match Rank:1
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AGCTCYAAAASAGRGM
GNCTATAAAAGG----
 C T G A A C T G A G T C G A C T A G T C G A C T C G T A C G T A G C T A C T G A A T C G C G T A A C T G C T A G C T A G G T C A
A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G A C G T A C G T A C G T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AGCTCYAAAASAGRGM
GGCTCYAKCAYC----
 C T G A A C T G A G T C G A C T A G T C G A C T C G T A C G T A G C T A C T G A A T C G C G T A A C T G C T A G C T A G G T C A
C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C A C G T A C G T A C G T A C G T

PH0068.1_Hoxc13/Jaspar

Match Rank:3
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--AGCTCYAAAASAGRGM
AAAGCTCGTAAAATTT--
 A C G T A C G T C T G A A C T G A G T C G A C T A G T C G A C T C G T A C G T A G C T A C T G A A T C G C G T A A C T G C T A G C T A G G T C A
G C A T G C T A C G T A A C T G T A G C A G C T G A T C C T A G A G C T C G T A C G T A C G T A G C T A G C A T A G C T C G A T A C G T A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:4
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----AGCTCYAAAASAGRGM
CCTTCGGCGCCAAAAGG----
 A C G T A C G T A C G T A C G T A C G T C T G A A C T G A G T C G A C T A G T C G A C T C G T A C G T A G C T A C T G A A T C G C G T A A C T G C T A G C T A G G T C A
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G A C G T A C G T A C G T A C G T

PH0048.1_Hoxa13/Jaspar

Match Rank:5
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--AGCTCYAAAASAGRGM
AAACCTCGTAAAATTT--
 A C G T A C G T C T G A A C T G A G T C G A C T A G T C G A C T C G T A C G T A G C T A C T G A A T C G C G T A A C T G C T A G C T A G G T C A
G C T A C G T A G C T A A T C G T A G C A G C T G A T C C T A G A G C T C G T A C G T A G C T A G C T A G C A T A C G T C G A T A C G T A C G T

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.50
Offset:0
Orientation:forward strand
Alignment:AGCTCYAAAASAGRGM
NGNTCTAGAACCNGV-
 C T G A A C T G A G T C G A C T A G T C G A C T C G T A C G T A G C T A C T G A A T C G C G T A A C T G C T A G C T A G G T C A
C T G A T C A G G C T A A G C T A G T C G A C T C T G A C T A G T G C A C T G A A G T C G T A C G A T C A C T G T C G A A C G T

POL013.1_MED-1/Jaspar

Match Rank:7
Score:0.50
Offset:1
Orientation:forward strand
Alignment:AGCTCYAAAASAGRGM
-GCTCCG---------
 C T G A A C T G A G T C G A C T A G T C G A C T C G T A C G T A G C T A C T G A A T C G C G T A A C T G C T A G C T A G G T C A
A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:8
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-AGCTCYAAAASAGRGM
CGGTTTCAAA-------
 A C G T C T G A A C T G A G T C G A C T A G T C G A C T C G T A C G T A G C T A C T G A A T C G C G T A A C T G C T A G C T A G G T C A
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

CDX2/MA0465.1/Jaspar

Match Rank:9
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-AGCTCYAAAASAGRGM
AAGCCATAAAA------
 A C G T C T G A A C T G A G T C G A C T A G T C G A C T C G T A C G T A G C T A C T G A A T C G C G T A A C T G C T A G C T A G G T C A
T C G A C T G A T C A G A G T C G T A C C G T A A C G T C G T A C G T A C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:AGCTCYAAAASAGRGM
NGCTN-----------
 C T G A A C T G A G T C G A C T A G T C G A C T C G T A C G T A G C T A C T G A A T C G C G T A A C T G C T A G C T A G G T C A
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T